RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PDCD6O75340 191 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 IGLV1-47P01700 117 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 MT-ND4P03905 459 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 PSMB9P28065 219 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 GDNFP39905 211 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 DYNLT3P51808 116 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 RPS27AP62979 156 aaKnown RBP19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 FAM189A2Q15884 450 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 SSX2Q16385 188 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 BRICD5Q6PL45 260 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 OR2W3Q7Z3T1 314 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 OR4P4Q8NGL7 312 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 OR9G1Q8NH87 305 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 TM2D1Q9BX74 207 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 ZNF286AQ9HBT8 521 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 DPM3Q9P2X0 92 aa19.7■□□□□ 0.74
SDF2L1-201ENST00000248958 TMEM14DPA8MWL7 114 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 ORC5O43913 435 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 ARSBP15848 533 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 MYL9P24844 172 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 NFYBP25208 207 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 CEACAM3P40198 252 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 NEDD4LQ96PU5 975 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 GFI1Q99684 422 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 URM1Q9BTM9 101 aaKnown RBP19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 ZNF747Q9BV97 191 aa19.69■□□□□ 0.74
SDF2L1-201ENST00000248958 LEUTXA8MZ59 168 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 ARHGDIBP52566 201 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 RELBQ01201 579 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 RAB11BQ15907 218 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 HLA-DRB5Q30154 266 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 LDLRAD2Q5SZI1 272 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 C6orf183Q5T699 404 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 SIGIRRQ6IA17 410 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 TRAT1Q6PIZ9 186 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 BAIAP2L2Q6UXY1 529 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 DYNAPQ8N1N2 210 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 GAPTQ8N292 157 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 PITPNC1Q9UKF7 332 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 TRAPPC2LQ9UL33 140 aa19.68■□□□□ 0.74
SDF2L1-201ENST00000248958 MDKP21741 143 aaPredicted RBP19.67■□□□□ 0.74
SDF2L1-201ENST00000248958 QRFPP83859 136 aa19.67■□□□□ 0.74
SDF2L1-201ENST00000248958 UNC119Q13432 240 aa19.67■□□□□ 0.74
SDF2L1-201ENST00000248958 OR10K2Q6IF99 312 aa19.67■□□□□ 0.74
SDF2L1-201ENST00000248958 DTX3Q8N9I9 347 aa19.67■□□□□ 0.74
SDF2L1-201ENST00000248958 OR52M1Q8NGK5 317 aa19.67■□□□□ 0.74
SDF2L1-201ENST00000248958 AMMECR1Q9Y4X0 333 aaPredicted RBP19.67■□□□□ 0.74
SDF2L1-201ENST00000248958 HILPDAQ9Y5L2 63 aa19.67■□□□□ 0.74
SDF2L1-201ENST00000248958 CLPSL1A2RUU4 121 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 FAM172BPA6NC97 362 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 OOSP1A8MZH6 123 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 PAX6P26367 422 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 FGF9P31371 208 aaPredicted RBP19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 SSTR5P35346 364 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 LY6EQ16553 131 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 TMEM30BQ3MIR4 351 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 SYT6Q5T7P8 510 aaPredicted RBP19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 SHISA2Q6UWI4 295 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 RFESDQ8TAC1 157 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 PIFOQ8TCI5 191 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 CCDC107Q8WV48 283 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 ARL11Q969Q4 196 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 FBLN5Q9UBX5 448 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 STUB1Q9UNE7 303 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 TCF19Q9Y242 345 aa19.66■□□□□ 0.74
SDF2L1-201ENST00000248958 TRAV39A0A0B4J263 110 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 C15orf65H3BRN8 121 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 BUB1B-PAK6H3BSN5 160 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 TSPAN9O75954 239 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 CHATP28329 748 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 OLFML2AQ68BL7 652 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 ZNF554Q86TJ5 538 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 TAF15Q92804 592 aaKnown RBP eCLIP19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 MMP28Q9H239 520 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 C16orf95Q9H693 158 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 STEAP1Q9UHE8 339 aa19.65■□□□□ 0.74
SDF2L1-201ENST00000248958 UBE2QL1A1L167 161 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 J3QR06 171 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 SPINT2O43291 252 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 RAB3BP20337 219 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 BRS3P32247 399 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 P2RY14Q15391 338 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 LTC4SQ16873 150 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 Q3ZCU0 254 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 PLA1AQ53H76 456 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 NKAPLQ5M9Q1 402 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 C22orf42Q6IC83 251 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 CCDC144NLQ6NUI1 221 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 Q6ZSV7 163 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 OR4K15Q8NH41 348 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 FAM3DQ96BQ1 224 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 RANBP3Q9H6Z4 567 aaPredicted RBP19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 SSR3Q9UNL2 185 aa19.64■□□□□ 0.73
SDF2L1-201ENST00000248958 F2RL2O00254 374 aa19.63■□□□□ 0.73
SDF2L1-201ENST00000248958 OR51D1Q8NGF3 324 aa19.63■□□□□ 0.73
SDF2L1-201ENST00000248958 LPAR5Q9H1C0 372 aa19.63■□□□□ 0.73
SDF2L1-201ENST00000248958 MBNL3Q9NUK0 354 aaKnown RBP19.63■□□□□ 0.73
SDF2L1-201ENST00000248958 KCNIP1Q9NZI2 227 aa19.63■□□□□ 0.73
SDF2L1-201ENST00000248958 PSG11Q9UQ72 335 aa19.63■□□□□ 0.73
SDF2L1-201ENST00000248958 SDCBPO00560 298 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms