RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BDP58876 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BCP62807 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 ZNF154Q13106 437 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST2H2BEQ16778 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.06□□□□□ -0.8
SOX9-201ENST00000245479 TMPRSS7Q7RTY8 843 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 FBXL14Q8N1E6 418 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 OR4C5Q8NGB2 326 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 ASB10Q8WXI3 467 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BHQ93079 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 GPX7Q96SL4 187 aaPredicted RBP10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BNQ99877 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 HIST1H2BMQ99879 126 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 PLEKHA3Q9HB20 300 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 SLC2A9Q9NRM0 540 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 ATRXP46100 2492 aa10.06□□□□□ -0.8
SOX9-201ENST00000245479 CFAP47Q6ZTR5 3102 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 IGHV3-13P01766 116 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 IGHV3-7P01780 117 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 TAAR9Q96RI9 348 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 CYTL1Q9NRR1 136 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 DVL1O14640 695 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 ZNF737O75373 536 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 SNRPCP09234 159 aaKnown RBP10.05□□□□□ -0.8
SOX9-201ENST00000245479 GABRA4P48169 554 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 CEACAM16Q2WEN9 425 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 FAM78BQ5VT40 261 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 RHBDD2Q6NTF9 364 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 DEFB123Q8N688 67 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 PSENENQ9NZ42 101 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 DOCK11Q5JSL3 2073 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 GCGP01275 180 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 CLPSP04118 112 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 FAM157CP0CG43 387 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 UBE2G2P60604 165 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 ZNF684Q5T5D7 378 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 CXorf67Q86X51 503 aaPredicted RBP10.05□□□□□ -0.8
SOX9-201ENST00000245479 GCNT2Q8N0V5 402 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 LRRC75AQ8NAA5 344 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 ARRDC1-AS1Q9H2J1 176 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 Q9N2K0 584 aa10.05□□□□□ -0.8
SOX9-201ENST00000245479 A0A0G2JMM0 328 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 A0A1W2PPB8 328 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 A0A1W2PRS3 328 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 NKX2-6A6NCS4 301 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 KIR3DP1A8MWS1 328 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 C9JQL5 133 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 TRAPPC2LH3BP13 241 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 DPPA3Q6W0C5 159 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 SLC35E3Q7Z769 313 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 SH3BGRL2Q9UJC5 107 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 MCTS1Q9ULC4 181 aaKnown RBP10.04□□□□□ -0.8
SOX9-201ENST00000245479 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 CHST1O43916 411 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 CYB5R3P00387 301 aaPredicted RBP10.04□□□□□ -0.8
SOX9-201ENST00000245479 RAC2P15153 192 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 MSX1P28360 303 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 GLIPR1P48060 266 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 DHRS13Q6UX07 377 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 HEPN1Q6WQI6 88 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 WBP1Q96G27 269 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 NDUFAF3Q9BU61 184 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 RNF122Q9H9V4 155 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 P4HTMQ9NXG6 502 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
SOX9-201ENST00000245479 ATMQ13315 3056 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 SIAH2O43255 324 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 HSPB1P04792 205 aaKnown RBP10.04□□□□□ -0.8
SOX9-201ENST00000245479 PGA3P0DJD8 388 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 BMP5P22003 454 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 CLDN15P56746 228 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 ZXDAP98168 799 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 ROM1Q03395 351 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 MSMO1Q15800 293 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 SLC25A26Q70HW3 274 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 MRPL21Q7Z2W9 205 aaKnown RBP10.04□□□□□ -0.8
SOX9-201ENST00000245479 ZNF100Q8IYN0 542 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 LIPHQ8WWY8 451 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 PP6455Q8WZ26 134 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 ZNF665Q9H7R5 613 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 NAT8Q9UHE5 227 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 LHFPL6Q9Y693 200 aa10.04□□□□□ -0.8
SOX9-201ENST00000245479 WDR1O75083 606 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 TUSC2O75896 110 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 DXOO77932 396 aaKnown RBP10.03□□□□□ -0.8
SOX9-201ENST00000245479 OR10J1P30954 320 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 OR3A1P47881 315 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 PIGYQ3MUY2 71 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 ATP1A1-AS1Q5TC04 95 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 CMTM2Q8TAZ6 248 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 EXTL1Q92935 676 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 MVB12AQ96EY5 273 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 GALNT14Q96FL9 552 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 TECTBQ96PL2 329 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 SLC25A22Q9H936 323 aa10.03□□□□□ -0.8
SOX9-201ENST00000245479 SELEP16581 610 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms