RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TOR1AO14656 332 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 SPINT2O43291 252 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 ORC5O43913 435 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 SCGNO76038 276 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 IL1AP01583 271 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 MT-ND4P03905 459 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 ARG1P05089 322 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 RAB6AP20340 208 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 BLVRBP30043 206 aaPredicted RBP9.2□□□□□ -0.94
SF3B6-201ENST00000233468 ARHGDIBP52566 201 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 PRRX1P54821 245 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 SCAND1P57086 179 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 OR10A3P58181 314 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 MRPS15P82914 257 aaKnown RBP9.2□□□□□ -0.94
SF3B6-201ENST00000233468 KLRD1Q13241 179 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 DYNC1I2Q13409 638 aaKnown RBP9.2□□□□□ -0.94
SF3B6-201ENST00000233468 UNC119Q13432 240 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 DEFB112Q30KQ8 113 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 MINOS1Q5TGZ0 78 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 OR10K2Q6IF99 312 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 ZNF497Q6ZNH5 498 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 TCF23Q7RTU1 214 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 ZNF554Q86TJ5 538 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 BCL6BQ8N143 479 aaPredicted RBP9.2□□□□□ -0.94
SF3B6-201ENST00000233468 FAM89BQ8N5H3 189 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 OR11H6Q8NGC7 330 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 PLPPR1Q8TBJ4 325 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 MRGPRDQ8TDS7 321 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 CLEC7AQ9BXN2 247 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 CALYQ9NYX4 217 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 HSF4Q9ULV5 492 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 MGAT4AQ9UM21 535 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 MINOS1-NBL1R4GNA1 71 aa9.2□□□□□ -0.94
SF3B6-201ENST00000233468 A0A0U1RQK1 487 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 CHATP28329 748 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 SDC2P34741 201 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 SAA4P35542 130 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 CLDN12P56749 244 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 AANATQ16613 207 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 SFXN4Q6P4A7 337 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 C12orf54Q6X4T0 127 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 Q6YL49 198 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 Q6ZTK2 550 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 OR13A1Q8NGR1 328 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 OR5R1Q8NH85 324 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 FAM216AQ8WUB2 273 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 PHF21AQ96BD5 680 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 YIPF6Q96EC8 236 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 MALSU1Q96EH3 234 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 LPAR5Q9H1C0 372 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 LINC00574Q9H8X3 128 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 CHMP1AQ9HD42 196 aaPredicted RBP9.19□□□□□ -0.94
SF3B6-201ENST00000233468 IDI2-AS1Q9NZ38 188 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 DAPK2Q9UIK4 370 aa9.19□□□□□ -0.94
SF3B6-201ENST00000233468 IGHV2-26A0A0B4J1V2 119 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 TMEM272A0A1B0GTI8 110 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 A0A1W2PRD5 423 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 A0A1W2PRF3 423 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 A0A1W2PRM7 423 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 SHISA3A0PJX4 238 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 MEX3AA1L020 520 aaKnown RBP9.18□□□□□ -0.94
SF3B6-201ENST00000233468 UBE2QL1A1L167 161 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 NPIPB11E5RHQ5 1161 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 LDLRAD4O15165 306 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 NFYBP25208 207 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 CEACAM3P40198 252 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 VEGFCP49767 419 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 MXD1Q05195 221 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 C17orf58Q2M2W7 97 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 ZNF626Q68DY1 528 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 SIGIRRQ6IA17 410 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 HCP5Q6MZN7 132 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 MOB1BQ7L9L4 216 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 GPR141Q7Z602 305 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 LDLRAD3Q86YD5 345 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 GAPTQ8N292 157 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 BEND2Q8NDZ0 799 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 OR52M1Q8NGK5 317 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 OR13F1Q8NGS4 319 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 CCDC107Q8WV48 283 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 ARL11Q969Q4 196 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 ZNF48Q96MX3 618 aaPredicted RBP9.18□□□□□ -0.94
SF3B6-201ENST00000233468 CENPOQ9BU64 300 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 ABRACLQ9P1F3 81 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 AMMECR1Q9Y4X0 333 aaPredicted RBP9.18□□□□□ -0.94
SF3B6-201ENST00000233468 ETV7Q9Y603 341 aa9.18□□□□□ -0.94
SF3B6-201ENST00000233468 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 A0A087X0M5 115 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 A0A1B0GX30 115 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 DNAJC9-AS1A6NH13 148 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 ODF3BA8MYP8 253 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 LEUTXA8MZ59 168 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 HOXA3O43365 443 aaPredicted RBP9.17□□□□□ -0.94
SF3B6-201ENST00000233468 CRYBA1P05813 215 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 RNASE1P07998 156 aaKnown RBP9.17□□□□□ -0.94
SF3B6-201ENST00000233468 MELTFP08582 738 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 SMIM18P0DKX4 95 aa9.17□□□□□ -0.94
SF3B6-201ENST00000233468 CGB3P0DN86 165 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms