RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 FOXRED1Q96CU9 486 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-201ENST00000230480 KIRREL1Q96J84 757 aa11.1□□□□□ -0.63
VEGFA-201ENST00000230480 NICN1Q9BSH3 213 aa11.1□□□□□ -0.63
VEGFA-201ENST00000230480 TMEM133Q9H2Q1 129 aa11.1□□□□□ -0.63
VEGFA-201ENST00000230480 HEXA-AS1Q9H8Q6 139 aa11.1□□□□□ -0.63
VEGFA-201ENST00000230480 TNFRSF19Q9NS68 423 aa11.1□□□□□ -0.63
VEGFA-201ENST00000230480 C1RLQ9NZP8 487 aa11.1□□□□□ -0.63
VEGFA-201ENST00000230480 GLS2Q9UI32 602 aa11.1□□□□□ -0.63
VEGFA-201ENST00000230480 SESN1Q9Y6P5 492 aa11.1□□□□□ -0.63
VEGFA-201ENST00000230480 IGHV2-26A0A0B4J1V2 119 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 KBTBD11-OT1A0A1B0GTJ5 212 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 ANKRD34BA5PLL1 514 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 ZNF780AO75290 641 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-201ENST00000230480 OR7C1O76099 320 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-201ENST00000230480 CDK2P24941 298 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 TMEM50BP56557 158 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 CLDN12P56749 244 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 TRAM1Q15629 374 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 MPV17LQ2QL34 196 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 SLC35E4Q6ICL7 350 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 ZNF497Q6ZNH5 498 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 PPP1R35Q8TAP8 253 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 FCGR1BQ92637 280 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 THRSPQ92748 146 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 FAM46BQ96A09 425 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 MRPS24Q96EL2 167 aaKnown RBP11.09□□□□□ -0.63
VEGFA-201ENST00000230480 CPNE2Q96FN4 548 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-201ENST00000230480 TM2D1Q9BX74 207 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 SELENOIQ9C0D9 397 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 LPAR5Q9H1C0 372 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 MMP27Q9H306 513 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 TCF7L1Q9HCS4 588 aa11.09□□□□□ -0.63
VEGFA-201ENST00000230480 ZNF729A6NN14 1252 aaPredicted RBP11.08□□□□□ -0.64
VEGFA-201ENST00000230480 SLC17A2O00624 439 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 GPR137BO60478 399 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 CSTBP04080 98 aaKnown RBP11.08□□□□□ -0.64
VEGFA-201ENST00000230480 PSMA1P25786 263 aaKnown RBP11.08□□□□□ -0.64
VEGFA-201ENST00000230480 SSTR5P35346 364 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 RAB13P51153 203 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 KRTAP10-3P60369 221 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 RPS27AP62979 156 aaKnown RBP11.08□□□□□ -0.64
VEGFA-201ENST00000230480 IFITM3Q01628 133 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 CD300CQ08708 224 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 P2RY14Q15391 338 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 AWAT1Q58HT5 328 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 RBMS3Q6XE24 437 aaKnown RBP11.08□□□□□ -0.64
VEGFA-201ENST00000230480 LINC00596Q86U02 117 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 FAM89BQ8N5H3 189 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 RFESDQ8TAC1 157 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 UBALD1Q8TB05 177 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 MRGPRDQ8TDS7 321 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 SSMEM1Q8WWF3 244 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 SULT4A1Q9BR01 284 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 RNF167Q9H6Y7 350 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 POMT1Q9Y6A1 747 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 VWFP04275 2813 aa11.08□□□□□ -0.64
VEGFA-201ENST00000230480 MEIKINA0A087WXM9 373 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 TRAV1-2A0A0B4J238 106 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 A0A1W2PPH5 198 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A10PA6NDY2 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A18PA6NE21 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A16PA6NEW6 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A20PA6NIJ5 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A7PA6NKC0 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A22PA8MWA6 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A12PA8MX19 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A5PA8MXJ8 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A23PA8MXZ1 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 CCRL2O00421 344 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 CHST1O43916 411 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 MPIG6BO95866 241 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FBP1P09467 338 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A15PP0C7V4 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A13PP0C7W8 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A14PP0C7W9 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 FAM90A24PP0C7X0 464 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 CFPP27918 469 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 CHATP28329 748 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 LOXL3P58215 753 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 ZNF45Q02386 682 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 DIAPH2-AS1Q14236 149 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 GPR176Q14439 515 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 ATAD3CQ5T2N8 411 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 GLT8D1Q68CQ7 371 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 RAB12Q6IQ22 244 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 LYSMD2Q8IV50 215 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 LEAP2Q969E1 77 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 OR51E2Q9H255 320 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 ZMAT3Q9HA38 289 aaKnown RBP11.07□□□□□ -0.64
VEGFA-201ENST00000230480 TXNL4BQ9NX01 149 aaKnown RBP11.07□□□□□ -0.64
VEGFA-201ENST00000230480 CALYQ9NYX4 217 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 CCDC59Q9P031 241 aaKnown RBP11.07□□□□□ -0.64
VEGFA-201ENST00000230480 GHRLQ9UBU3 117 aa11.07□□□□□ -0.64
VEGFA-201ENST00000230480 MGAM2Q2M2H8 2515 aa11.06□□□□□ -0.64
VEGFA-201ENST00000230480 TRGV10A0A0A0MS01 117 aa11.06□□□□□ -0.64
VEGFA-201ENST00000230480 A0A0B4J203 849 aa11.06□□□□□ -0.64
VEGFA-201ENST00000230480 SOCS1O15524 211 aa11.06□□□□□ -0.64
VEGFA-201ENST00000230480 CRTAPO75718 401 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-201ENST00000230480 IL1AP01583 271 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms