RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 IFITM3Q01628 133 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 CLEC12BQ2HXU8 276 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 FNDC7Q5VTL7 733 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 C19orf35Q6ZS72 473 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 Q8IYB0 196 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 TCTEX1D1Q8N7M0 179 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 OR52N4Q8NGI2 321 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 TMEM37Q8WXS4 190 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 PIK3IP1Q96FE7 263 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 MS4A10Q96PG2 267 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 MIXL1Q9H2W2 232 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 SFT2D2O95562 160 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 IGF2P01344 180 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 KLK2P20151 261 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 GSK3AP49840 483 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 TAS2R45P59539 299 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 TNFAIP6P98066 277 aaPredicted RBP8.19□□□□□ -1.1
CCDC113-201ENST00000219299 SMIM21Q3B7S5 101 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 MOB1BQ7L9L4 216 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 CBLN2Q8IUK8 224 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 CIB3Q96Q77 187 aaPredicted RBP8.19□□□□□ -1.1
CCDC113-201ENST00000219299 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 TREM2Q9NZC2 230 aa8.19□□□□□ -1.1
CCDC113-201ENST00000219299 C9orf170A2RU37 121 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 CLPSP04118 112 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 INHBBP09529 407 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 CXCL3P19876 107 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 RPS4XP62701 263 aaKnown RBP8.18□□□□□ -1.1
CCDC113-201ENST00000219299 PPP1R1AQ13522 171 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 DTX1Q86Y01 620 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 CLCF1Q9UBD9 225 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 STARD10Q9Y365 291 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 CHEK1O14757 476 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 PTBP3O95758 552 aaKnown RBP8.18□□□□□ -1.1
CCDC113-201ENST00000219299 CRYBA1P05813 215 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 MST1P26927 711 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 UBE2G2P60604 165 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 LYPD8Q6UX82 237 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 OSR2Q8N2R0 312 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 OR4S1Q8NGB4 309 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 OR11H7Q8NGC8 314 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 ZNF519Q8TB69 540 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 SNRNP40Q96DI7 357 aaKnown RBP8.18□□□□□ -1.1
CCDC113-201ENST00000219299 RSRP1Q9BUV0 290 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 OR5V1Q9UGF6 321 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 CCKARP32238 428 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 LHX2P50458 406 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 PLA1AQ53H76 456 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 NCMAPQ5T1S8 102 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 SSUH2Q9Y2M2 353 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 HSBP1O75506 76 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 DUS4LO95620 317 aaKnown RBP8.18□□□□□ -1.1
CCDC113-201ENST00000219299 FAM27E3Q08E93 113 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 AWAT1Q58HT5 328 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 RPL7L1Q6DKI1 246 aaKnown RBP8.18□□□□□ -1.1
CCDC113-201ENST00000219299 OVCH2Q7RTZ1 564 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 WDYHV1Q96HA8 205 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 ZNF355PQ9NSJ1 428 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 LIN7CQ9NUP9 197 aaKnown RBP8.18□□□□□ -1.1
CCDC113-201ENST00000219299 KIAA1456Q9P272 454 aa8.18□□□□□ -1.1
CCDC113-201ENST00000219299 GTF3C1Q12789 2109 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PCDH15Q96QU1 1955 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PTGFRP43088 359 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 GALR1P47211 349 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PTTG1IPP53801 180 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PKIAP61925 76 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 HES1Q14469 280 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 MICBQ29980 383 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 FAHD2BQ6P2I3 314 aaPredicted RBP8.17□□□□□ -1.1
CCDC113-201ENST00000219299 SEZ6L2Q6UXD5 910 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 FAHD2AQ96GK7 314 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 SFXN3Q9BWM7 321 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 MAGT1Q9H0U3 335 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 LPAR3Q9UBY5 353 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 LRRK1Q38SD2 2015 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 C1QTNF9BB2RNN3 333 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 OGG1O15527 345 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 KLF4O43474 513 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 ZNF205O95201 554 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 CLDN18P56856 261 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 FAM57AQ8TBR7 257 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 FAM234AQ9H0X4 552 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 UBTD1Q9HAC8 227 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 FER1L5A0AVI2 2057 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 IGLV3-32A0A0A0MS00 114 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PPIHO43447 177 aaKnown RBP8.17□□□□□ -1.1
CCDC113-201ENST00000219299 EFNA2O43921 213 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 ONECUT2O95948 504 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 OPN1MWP04001 364 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 ADH4P08319 380 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 OPN1MW2P0DN77 364 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 OPN1MW3P0DN78 364 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 NANOS3P60323 173 aaKnown RBP8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PNRC1Q12796 327 aaPredicted RBP8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PMS2P11Q13670 270 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 IRF3Q14653 427 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 TMEM241Q24JQ0 296 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms