RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 TRAV39A0A0B4J263 110 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 A0A1W2PQD3 144 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 PRSS47A8MTI9 375 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 CEBPZOSA8MTT3 80 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 TRAPPC6AO75865 159 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 CST7O76096 145 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 ZNF823P16415 610 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 CD27P26842 260 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 RTP5Q14D33 572 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 THAP3Q8WTV1 239 aaPredicted RBP12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 CFAP54Q96N23 3096 aa12.83□□□□□ -0.36
TMEM38A-201ENST00000187762 FOXI3A8MTJ6 420 aaPredicted RBP12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 ZNF728P0DKX0 622 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 UBE2NP61088 152 aaKnown RBP12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 VHLLQ6RSH7 139 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 TMEM217Q8N7C4 229 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 PBOV1Q9GZY1 135 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 OR51I2Q9H344 312 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 LYRM2Q9NU23 88 aaPredicted RBP12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 PHF3Q92576 2039 aaKnown RBP12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 IGKV1D-43A0A0B4J1Z2 117 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 CIDEAO60543 219 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 TOMM40O96008 361 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 TAS2R30P59541 319 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 RPL23P62829 140 aaKnown RBP12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 PHLDA2Q53GA4 152 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 LCN15Q6UWW0 184 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 KMT5CQ86Y97 462 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 SUMF1Q8NBK3 374 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 AGMATQ9BSE5 352 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 TMEM9BQ9NQ34 198 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
TMEM38A-201ENST00000187762 LMO7DNF2Z398 122 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 TCN2P20062 427 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 GCH1P30793 250 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 GPER1Q99527 375 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 MCTS1Q9ULC4 181 aaKnown RBP12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 IGHV1OR21-1A0A087WYE8 117 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 SERPINE3A8MV23 424 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 SHISA8B8ZZ34 492 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 SSSCA1O60232 199 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 CMTM2Q8TAZ6 248 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 WDR87Q6ZQQ6 2873 aa12.81□□□□□ -0.36
TMEM38A-201ENST00000187762 ZNF205O95201 554 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 CDKN1AP38936 164 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 ZNF441Q8N8Z8 693 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 OR51E1Q8TCB6 317 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 VN1R17PQ8TDU5 208 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 CHRNA10Q9GZZ6 450 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 MED29Q9NX70 200 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 NXT1Q9UKK6 140 aaKnown RBP12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 VDAC3Q9Y277 283 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 NKX2-6A6NCS4 301 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 MS4A18H0YCH9 400 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 S100A7P31151 101 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 FBXW4P57775 412 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 MS4A18Q3C1V0 323 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 LINC01551Q86U37 167 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 CALHM1Q8IU99 346 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 RNF133Q8WVZ7 376 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 VPS25Q9BRG1 176 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 HDHD3Q9BSH5 251 aaPredicted RBP12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 MAGT1Q9H0U3 335 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 PLK3Q9H4B4 646 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 ZNF552Q9H707 407 aaPredicted RBP12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 EXPH5Q8NEV8 1989 aa12.8□□□□□ -0.36
TMEM38A-201ENST00000187762 CEP192Q8TEP8 1941 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 KBTBD11O94819 623 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 FXYD4P59646 89 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 RPL15P61313 204 aaKnown RBP12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 MRPS34P82930 218 aaKnown RBP12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 OR5D18Q8NGL1 313 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 SEPSECSQ9HD40 501 aaKnown RBP12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 SLC2A9Q9NRM0 540 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 RPRMQ9NS64 109 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 ANXA10Q9UJ72 324 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 ANKUB1A6NFN9 424 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 CCDC85CA6NKD9 419 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 M0QZ24 198 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 PHF1O43189 567 aaPredicted RBP12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 IGHMP01871 453 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 SRP14P37108 136 aaKnown RBP12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 ZNF154Q13106 437 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 ZNF726P1Q15940 193 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 SLC25A24Q6NUK1 477 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 KLHL24Q6TFL4 600 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 MEX3BQ6ZN04 569 aaKnown RBP12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 Q6ZVH6 145 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 KCNE4Q8WWG9 221 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 ATP5SQ99766 215 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 TRAPPC1Q9Y5R8 145 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 WDFY3Q8IZQ1 3526 aa12.79□□□□□ -0.36
TMEM38A-201ENST00000187762 TMEM238LA0A1B0GVL6 79 aa12.78□□□□□ -0.36
TMEM38A-201ENST00000187762 HSBP1L1C9JCN9 74 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms