RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 C9orf152Q5JTZ5 239 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 TMPRSS11AQ6ZMR5 421 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 OR2W3Q7Z3T1 314 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 ZNF329Q86UD4 541 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 TGIF2LXQ8IUE1 241 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 GAPTQ8N292 157 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 PQLC1Q8N2U9 271 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 TMEM104Q8NE00 496 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 OR10X1Q8NGY0 326 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 SMIM19Q96E16 107 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 P2RX4Q99571 388 aa12.53□□□□□ -0.4
ERCC1-201ENST00000013807 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
ERCC1-201ENST00000013807 SIRT4Q9Y6E7 314 aaPredicted RBP12.53□□□□□ -0.4
ERCC1-201ENST00000013807 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 WI2-2373I1.2A0A1W2PRP0 233 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 TMEM30CPA0ZSE6 113 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 IRGMA1A4Y4 181 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 HSD17B6O14756 317 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 GEMIN2O14893 280 aaKnown RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 OR7C1O76099 320 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 IGKV1D-33P01593 117 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 IGKV1-33P01594 117 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 MT-ND4P03905 459 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 MYCNOSP40205 109 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF137PP52743 207 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 GPR176Q14439 515 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 HES1Q14469 280 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 SMN1Q16637 294 aaKnown RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 DDI2Q5TDH0 399 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 DMKNQ6E0U4 476 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF497Q6ZNH5 498 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF485Q8NCK3 441 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 MRPS24Q96EL2 167 aaKnown RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 EAF1Q96JC9 268 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 NOL4LQ96MY1 436 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 FAM192AQ9GZU8 254 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 ABCG5Q9H222 651 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 PLSCR3Q9NRY6 295 aa12.52□□□□□ -0.41
ERCC1-201ENST00000013807 LIN7CQ9NUP9 197 aaKnown RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 RCC2Q9P258 522 aaKnown RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 DIMT1Q9UNQ2 313 aaKnown RBP12.52□□□□□ -0.41
ERCC1-201ENST00000013807 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 GTF2F2P13984 249 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 CD1BP29016 333 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 GNG10P50151 68 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 RPS11P62280 158 aaKnown RBP eCLIP12.51□□□□□ -0.41
ERCC1-201ENST00000013807 PPP3R1P63098 170 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 SLC35B1P78383 322 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 TMEM30BQ3MIR4 351 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 VAX1Q5SQQ9 334 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 STEAP3Q658P3 488 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 SLC35E3Q7Z769 313 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 FOXRED2Q8IWF2 684 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 CDH26Q8IXH8 852 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 STPG2Q8N412 459 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 RNF152Q8N8N0 203 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 GFOD1Q9NXC2 390 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 SMPD3Q9NY59 655 aaPredicted RBP12.51□□□□□ -0.41
ERCC1-201ENST00000013807 ING4Q9UNL4 249 aa12.51□□□□□ -0.41
ERCC1-201ENST00000013807 SORL1Q92673 2214 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 TRAV39A0A0B4J263 110 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 H0YHG0 523 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 AP4M1O00189 453 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 LALBAP00709 142 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 FSTP19883 344 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 RIPK1Q13546 671 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 HNF4GQ14541 408 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 LTC4SQ16873 150 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 Q499Y3 187 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 YIF1BQ5BJH7 314 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 KHDC1LQ5JSQ8 128 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 TEX38Q6PEX7 206 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 LYPD6Q86Y78 171 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 Q8N9W7 124 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 OR8H1Q8NGG4 311 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 OR2T10Q8NGZ9 312 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 RTN4IP1Q8WWV3 396 aaPredicted RBP12.5□□□□□ -0.41
ERCC1-201ENST00000013807 GHSRQ92847 366 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 ARL11Q969Q4 196 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 S100A13Q99584 98 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 GON7Q9BXV9 100 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 SPACA1Q9HBV2 294 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF580Q9UK33 172 aa12.5□□□□□ -0.41
ERCC1-201ENST00000013807 EXOSC1Q9Y3B2 195 aaKnown RBP12.5□□□□□ -0.41
ERCC1-201ENST00000013807 A0A1W2PPE3 182 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 LINC01548A6NM66 108 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 TXNL1O43396 289 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 SERPINA2P20848 420 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 VHLP40337 213 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 GP2P55259 537 aaKnown RBP12.49□□□□□ -0.41
ERCC1-201ENST00000013807 SLC25A48Q6ZT89 311 aaKnown RBP12.49□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF695Q8IW36 515 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF439Q8NDP4 499 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF555Q8NEP9 628 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 PGLYRP3Q96LB9 341 aa12.49□□□□□ -0.41
ERCC1-201ENST00000013807 ZNF184Q99676 751 aaPredicted RBP12.49□□□□□ -0.41
ERCC1-201ENST00000013807 ZMAT5Q9UDW3 170 aaKnown RBP12.49□□□□□ -0.41
ERCC1-201ENST00000013807 DNAH9Q9NYC9 4486 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms