RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Trav5d-4Q5R1F6 114 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Znf629Q6A085 867 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Znf511Q6P0X2 227 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Vash1Q8C1W1 375 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Slc35a3Q8R1T4 326 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr1279Q8VF38 313 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Fitm1Q91V79 292 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Lrrc26Q91W20 331 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Scgb1b27Q91WB5 92 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Lamp5Q9D387 280 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Usp34Q6ZQ93 3582 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Atg2bQ80XK6 2075 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Scgb1b29D2XZ31 93 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Prrt2E9PUL5 346 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Scgb1b20E9PWZ2 93 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 BaxQ07813 192 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Q24JP4 165 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Slc5a12Q49B93 619 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Prickle3Q80VL3 624 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Bhlhe23Q8BGW3 223 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Fbxw19Q8C2W8 466 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Cdc42ep2Q8JZX9 214 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Tmem33Q9CR67 247 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Eif1bQ9CXU9 113 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Ccr9Q9WUT7 369 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Timm8a1Q9WVA2 97 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Sh2b3O09039 548 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Tcf21O35437 179 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Ccl20O89093 97 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Cox5aP12787 146 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Rpl29P47915 160 aaKnown RBP10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Q149G0 166 aaKnown RBP10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Elavl2Q60899 360 aaKnown RBP10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Slc17a5Q8BN82 495 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Sectm1aQ921W8 192 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Glrx2Q923X4 156 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Rpp14Q9CQH8 122 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Klf5Q9Z0Z7 446 aaKnown RBP10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Bcl3Q9Z2F6 448 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Lrit3W8DXL4 681 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Gm5890A0A140LI04 305 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Mtg2A2AFK4 405 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Muc3E9PWP7 378 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 IfnabL7MTU6 190 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Mtnd4lP03903 98 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 RelP15307 587 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Prph2P15499 346 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Htr5aP30966 357 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Tpt1P63028 172 aaKnown RBP10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Tex52Q3TTI8 308 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Grxcr2Q3TYR5 254 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr132Q7TRI8 313 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 SheQ8BSD5 492 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr788Q8VFI0 311 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr578Q8VH17 313 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Ddb2Q99J79 432 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 2900055J20RikQ9D6G3 140 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 MvkQ9R008 395 aa10.45□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Dock5B2RY04 1868 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Nup188Q6ZQH8 1759 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Scn11aQ9R053 1765 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Rif1Q6PR54 2419 aaKnown RBP10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Zfp980A2A9J5 645 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Rhox3gB9EJQ9 160 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Psg26Q4KL65 475 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Ankrd33Q8BXP5 385 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 March11Q8CBH7 400 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr960Q8VET5 316 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr497Q8VG08 314 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 GhitmQ91VC9 346 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 MrgprgQ91ZB5 289 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr888Q9EQA5 314 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Zfp229E9PWT2 705 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr750E9Q0Z1 331 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Gm1527Q3V0P3 650 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Zfp933Q6PEE4 468 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Olfr1111Q7TR55 312 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 BC049730Q810N3 246 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Zc3h3Q8CHP0 950 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Vrk3Q8K3G5 453 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 BphlQ8R164 291 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Cby1Q9D1C2 127 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Gm42420A0A0J9YUQ2 99 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Ptx3P48759 381 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 St8sia5P70126 412 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Rbp4Q00724 201 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Vezf1Q5SXC4 518 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Il31Q6EAL8 163 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Slc46a1Q6PEM8 459 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Ell3Q80VR2 395 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Q80W69 301 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Rpl7l1Q9D8M4 246 aaKnown RBP10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Abhd16aQ9Z1Q2 558 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Med12A2AGH6 2190 aa10.44□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Dgat2l6A2ADU8 337 aa10.43□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Vmn1r170K7N6W9 304 aa10.43□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Lhx8O35652 367 aa10.43□□□□□ -0.74
Ndc1-204ENSMUST00000139560 P01795 144 aa10.43□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Slc25a4P48962 298 aaKnown RBP10.43□□□□□ -0.74
Ndc1-204ENSMUST00000139560 Zfp273Q7M6W8 501 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms