RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Zfp944E9PUS4 492 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Itln1O88310 313 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 IfngP01580 155 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 P01637 128 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 P01667 111 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Hsd17b8P50171 259 aaKnown RBP9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Anxa7Q07076 463 aaKnown RBP9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Zfp235Q499D5 702 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Vezf1Q5SXC4 518 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr10Q60883 311 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rcor3Q6PGA0 451 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Inca1Q6PKN7 231 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 CebpeQ6PZD9 281 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Lcn10Q810Z1 182 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 CytipQ91VY6 359 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 MynnQ99MD8 610 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rab5aQ9CQD1 215 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Q9CQT9 129 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 HypmQ9CR04 117 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 ManbalQ9D8X0 85 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Slc2a8Q9JIF3 477 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Col6a4A2AX52 2309 aa9.64□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr913E9Q716 312 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Vmn2r30K7N5W1 852 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Vmn2r47K7N709 852 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ascl4M0QW46 144 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 LalbaP29752 143 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Abcd3P55096 659 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rab4aP56371 218 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rps11P62281 158 aaKnown RBP9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 ElobP62869 118 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Hormad2Q5SQP1 306 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Wdr34Q5U4F6 535 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 St6gal2Q76K27 524 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Bhlhe23Q8BGW3 223 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm9999Q8C5Y2 53 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm5111Q8C9M4 190 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Pom121Q8K3Z9 1200 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Vmn1r66Q8K4I0 310 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Vmn1r37Q8R2E4 302 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Snapc5Q8R2K7 98 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1412Q8VET3 321 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Rwdd3Q8VIL2 267 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Tm4sf5Q91XF2 196 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 FrkQ922K9 512 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Steap4Q923B6 470 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr116Q923Q6 321 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Dusp22Q99N11 184 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Znf593Q9DB42 134 aaKnown RBP9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Akip1Q9JJR5 212 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr455A0A0B4J1M2 317 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm6890A2BG94 208 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr628K7N6B2 316 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr895L7N210 316 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 EhfO70273 300 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Amy2P00688 508 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Adrb2P18762 418 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gpm6aP35802 278 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Id4P41139 161 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Cbr1P48758 277 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Tnfrsf26P83626 204 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Slc22a14Q497L9 629 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Il11ra1Q64385 432 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1509Q7TQQ0 308 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Fam120cQ8C3F2 1091 aaKnown RBP9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Lrrc20Q8CI70 184 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Lrrc61Q8R2R5 259 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1079Q8VF52 315 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 SdhbQ9CQA3 282 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Dkkl1Q9QZL9 230 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 MokQ9WVS4 420 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Syngr4Q9Z1L2 233 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Plxna3P70208 1872 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm45808A0A1B0GSH8 263 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 2010106E10RikA2ANY3 279 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Cypt3B1AY64 174 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm3543D3Z235 184 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Muc3E9PWP7 378 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Kcns2O35174 477 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Mtnd4lP03903 98 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Nkain2Q4PNJ2 208 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Prss54Q7M756 383 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Znf768Q8R0T2 568 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Seh1lQ8R2U0 360 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr1163Q8VFR4 316 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ear6Q923L7 155 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Slc31a2Q9CPU9 143 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Irak1bp1Q9ESJ7 259 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Jag2Q9QYE5 1247 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Olfr66F8VQ01 311 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Zfp870J3QMA4 560 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Tmem178bM0QWJ9 172 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ntsr1O88319 424 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 GbaP17439 515 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Ube2kP61087 200 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Klhdc2Q4G5Y1 406 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gpatch2Q7TQC7 527 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Gm13757Q7TR17 305 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Cdhr3Q8BL00 831 aa9.63□□□□□ -0.87
Msh3-201ENSMUST00000022220 Cnot4Q8BT14 575 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms