RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 TMEM30CPA0ZSE6 113 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 IGHV1-8P0DP01 117 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 CHATP28329 748 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 UBE2E1P51965 193 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 MXD1Q05195 221 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 SFXN4Q6P4A7 337 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 ZNF782Q6ZMW2 699 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-220ENST00000627371 ZNF497Q6ZNH5 498 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 USP43Q70EL4 1123 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 ZNF418Q8TF45 676 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-220ENST00000627371 NEDD4LQ96PU5 975 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 HEXA-AS1Q9H8Q6 139 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 ZNF729A6NN14 1252 aaPredicted RBP16.58■□□□□ 0.24
PTCD3-220ENST00000627371 TCF21O43680 179 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 TFAP2AP05549 437 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 CLEC2LP0C7M8 214 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 SLC2A2P11168 524 aaPredicted RBP16.58■□□□□ 0.24
PTCD3-220ENST00000627371 GLP1RP43220 463 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 ALDH3B2P48448 385 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 NKAPLQ5M9Q1 402 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 PIP4P2Q8N4L2 257 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 FAM89BQ8N5H3 189 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 ZNF565Q8N9K5 539 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 OR13A1Q8NGR1 328 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 ETAA1Q9NY74 926 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 RAB22AQ9UL26 194 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 SOX21Q9Y651 276 aaPredicted RBP16.58■□□□□ 0.24
PTCD3-220ENST00000627371 SESN1Q9Y6P5 492 aa16.58■□□□□ 0.24
PTCD3-220ENST00000627371 A0A0A6YYJ9 748 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 A0A0B4J203 849 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 NPFFO15130 113 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 CA11O75493 328 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 CGB3P0DN86 165 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 CGB7P0DN87 165 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 TGFBR1P36897 503 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 LSM3P62310 102 aaKnown RBP16.57■□□□□ 0.24
PTCD3-220ENST00000627371 PLA2G7Q13093 441 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 C17orf58Q2M2W7 97 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 HEPN1Q6WQI6 88 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 GAPTQ8N292 157 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 ZNF48Q96MX3 618 aaPredicted RBP16.57■□□□□ 0.24
PTCD3-220ENST00000627371 DAPK2Q9UIK4 370 aa16.57■□□□□ 0.24
PTCD3-220ENST00000627371 KBTBD11-OT1A0A1B0GTJ5 212 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 FOXI3A8MTJ6 420 aaPredicted RBP16.56■□□□□ 0.24
PTCD3-220ENST00000627371 MMP23AO75900 390 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 MT-ND4P03905 459 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 RAB6AP20340 208 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 COX7A1P24310 79 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 BLVRBP30043 206 aaPredicted RBP16.56■□□□□ 0.24
PTCD3-220ENST00000627371 HILS1P60008 231 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 PRAMEF5Q5TYX0 476 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 C6orf201Q7Z4U5 140 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 PNKDQ8N490 385 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 SIGLECL1Q8N7X8 197 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 OR13D1Q8NGV5 346 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 MRGPRDQ8TDS7 321 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 PTX4Q96A99 478 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 CYYR1Q96J86 154 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 CALYQ9NYX4 217 aa16.56■□□□□ 0.24
PTCD3-220ENST00000627371 A0A1W2PRD5 423 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 A0A1W2PRF3 423 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 A0A1W2PRM7 423 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 UBE2QL1A1L167 161 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 SOCS1O15524 211 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 CDK2P24941 298 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 VEGFCP49767 419 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 EFNB2P52799 333 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 FAM189A2Q15884 450 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 DEFB112Q30KQ8 113 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 RBMS3Q6XE24 437 aaKnown RBP16.55■□□□□ 0.24
PTCD3-220ENST00000627371 ANKRD13BQ86YJ7 626 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 OR56B1Q8NGI3 324 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 DYRK2Q92630 601 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 SULT4A1Q9BR01 284 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 TMEM133Q9H2Q1 129 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 PRDM13Q9H4Q3 707 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 LINC00574Q9H8X3 128 aa16.55■□□□□ 0.24
PTCD3-220ENST00000627371 TRAV39A0A0B4J263 110 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 A0A0U1RQK1 487 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 MDFIC2A0A1B0GVS7 189 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 GABARAPO95166 117 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 IL1AP01583 271 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 OMGP23515 440 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 SSTR5P35346 364 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 SAA4P35542 130 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 KRTAP21-3Q3LHN1 58 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 MIDNQ504T8 468 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 OR52W1Q6IF63 320 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 SLC16A12Q6ZSM3 486 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 GPR141Q7Z602 305 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 OR11H6Q8NGC7 330 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 CCDC107Q8WV48 283 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 JMJD8Q96S16 334 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 FAAP24Q9BTP7 215 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 PLEKHJ1Q9NW61 149 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 HSF4Q9ULV5 492 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 ATRQ13535 2644 aa16.54■□□□□ 0.24
PTCD3-220ENST00000627371 IGHV2-26A0A0B4J1V2 119 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 MEIOCA2RUB1 952 aa16.53■□□□□ 0.24
PTCD3-220ENST00000627371 NPIPB11E5RHQ5 1161 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms