RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 GP2P55259 537 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 SLC9A3R2Q15599 337 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 RAB11BQ15907 218 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 RSBN1Q5VWQ0 802 aaPredicted RBP11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 ZNF626Q68DY1 528 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 RAB12Q6IQ22 244 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 TCF23Q7RTU1 214 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 ZNF554Q86TJ5 538 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 TPRA1Q86W33 373 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 PNKDQ8N490 385 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 TPRX1Q8N7U7 411 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 BEND2Q8NDZ0 799 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 MALSU1Q96EH3 234 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 CLEC7AQ9BXN2 247 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 LINC00574Q9H8X3 128 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 ZNRD1Q9P1U0 126 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 FBLN5Q9UBX5 448 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 KIF25Q9UIL4 384 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 A0A087X0M5 115 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 A0A1B0GX30 115 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 POM121CA8CG34 1229 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 HOXA3O43365 443 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 TMEM127O75204 238 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 PDCD6O75340 191 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 IL1AP01583 271 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 CD34P28906 385 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 CEACAM3P40198 252 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 GLP1RP43220 463 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 RPS27AP62979 156 aaKnown RBP11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 FOXL1Q12952 345 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 KLRD1Q13241 179 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 HCP5Q6MZN7 132 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 C16orf87Q6PH81 154 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 GDPGP1Q6ZNW5 385 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 PDZD9Q8IXQ8 264 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 DYRK2Q92630 601 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 GCDHQ92947 438 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 NEDD4LQ96PU5 975 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 MDFIQ99750 246 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 TM2D1Q9BX74 207 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 PPIL3Q9H2H8 161 aaKnown RBP11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 RAB18Q9NP72 206 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 ESM1Q9NQ30 184 aa11.42□□□□□ -0.58
SNRPA1-216ENST00000626000 IGHV2-26A0A0B4J1V2 119 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 A0A1B0GUS0 222 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 ODF3BA8MYP8 253 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 AIPO00170 330 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 ORC5O43913 435 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 MPIG6BO95866 241 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 ARG1P05089 322 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 VSIG8P0DPA2 414 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 RAB3BP20337 219 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 COX7A1P24310 79 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 CDK2P24941 298 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 IER3P46695 156 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 PRRX1P54821 245 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 ZNF782Q6ZMW2 699 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 ZNF497Q6ZNH5 498 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 LIAT1Q6ZQX7 453 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 TMEM104Q8NE00 496 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 TSPAN14Q8NG11 270 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 NKX3-1Q99801 234 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 MEGF9Q9H1U4 602 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 BANF2Q9H503 90 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 ZNF696Q9H7X3 374 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 ETAA1Q9NY74 926 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 CALYQ9NYX4 217 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 STEAP1Q9UHE8 339 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 AMMECR1Q9Y4X0 333 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 PEX16Q9Y5Y5 336 aa11.41□□□□□ -0.58
SNRPA1-216ENST00000626000 A0A1W2PP11 408 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 VGLL3A8MV65 326 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 TOR1AO14656 332 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 HTR1DP28221 377 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 COMPP49747 757 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 DYNC1I2Q13409 638 aaKnown RBP11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 NEDD8Q15843 81 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 LRRC75BQ2VPJ9 315 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 Q3ZCU0 254 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 GAPTQ8N292 157 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 OR52M1Q8NGK5 317 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 FAM46BQ96A09 425 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 KCTD7Q96MP8 289 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 RIMS4Q9H426 269 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 TRAPPC2LQ9UL33 140 aa11.4□□□□□ -0.58
SNRPA1-216ENST00000626000 CUBNO60494 3623 aa11.39□□□□□ -0.59
SNRPA1-216ENST00000626000 MDFIC2A0A1B0GVS7 189 aa11.39□□□□□ -0.59
SNRPA1-216ENST00000626000 TMEM89A2RUT3 159 aa11.39□□□□□ -0.59
SNRPA1-216ENST00000626000 IFITM5A6NNB3 132 aa11.39□□□□□ -0.59
SNRPA1-216ENST00000626000 OOSP1A8MZH6 123 aa11.39□□□□□ -0.59
SNRPA1-216ENST00000626000 NPIPB11E5RHQ5 1161 aa11.39□□□□□ -0.59
SNRPA1-216ENST00000626000 SPINT2O43291 252 aa11.39□□□□□ -0.59
SNRPA1-216ENST00000626000 HKR1P10072 659 aa11.39□□□□□ -0.59
SNRPA1-216ENST00000626000 DYNLT3P51808 116 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms