RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NANOS3P60323 173 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 AQP3Q92482 292 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 RSG1Q9BU20 258 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 IGSF23A1L1A6 192 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 CA2P00918 260 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 HIST1H1EP10412 219 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 MYBPHQ13203 477 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 ANKRD55Q3KP44 614 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 TSPO2Q5TGU0 170 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 ACSM6Q6P461 480 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 ATRAIDQ6UW56 229 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 RPS19BP1Q86WX3 136 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 OPN3Q9H1Y3 402 aaPredicted RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 AAMDCQ9H7C9 122 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 RND3P61587 244 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 ZBTB34Q8NCN2 500 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 FOXB1Q99853 325 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 MRPS18BQ9Y676 258 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 SEC16AO15027 2179 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 TRBV5-7A0A0A0MS05 114 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 CLEC3BP05452 202 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 CYB561P49447 251 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 RPS23P62266 143 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 LSM6P62312 80 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 SAPCD1Q5SSQ6 148 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 MEF2BQ02080 365 aaPredicted RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 GABRA6Q16445 453 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 TCTN1Q2MV58 587 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 GAPTQ8N292 157 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 IGHV3-20A0A0C4DH32 117 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 A0A1W2PQD3 144 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 SLC22A20A6NK97 555 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 G3V3Y1 287 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 H0YL77 283 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 F2RP25116 425 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 DSCR4P56555 118 aaPredicted RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 RPS16P62249 146 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 OR13G1Q8NGZ3 307 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 H1FXQ92522 213 aaKnown RBP7.85□□□□□ -1.15
VCL-206ENST00000623461 SAP30LQ9HAJ7 183 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 RNF186Q9NXI6 227 aa7.85□□□□□ -1.15
VCL-206ENST00000623461 NGFP01138 241 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 HLA-DQA1P01909 254 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 TMEM252Q8N6L7 170 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 OR10X1Q8NGY0 326 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 OR10AC1Q8NH08 325 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 ALG14Q96F25 216 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 PATJQ8NI35 1801 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 HBZP02008 142 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 HIST1H1BP16401 226 aaKnown RBP7.84□□□□□ -1.15
VCL-206ENST00000623461 KLK2P20151 261 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 CAPZBP47756 277 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 GNG10P50151 68 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 P2RY4P51582 365 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 OR1C1Q15619 314 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 CDKN3Q16667 212 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 KMT5CQ86Y97 462 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 LINC01555Q8NAE3 123 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 APCDD1LQ8NCL9 501 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 OR6X1Q8NH79 312 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 SIT1Q9Y3P8 196 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 RAB29O14966 203 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 MDKP21741 143 aaPredicted RBP7.84□□□□□ -1.15
VCL-206ENST00000623461 KIR3DL2P43630 455 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 INSM1Q01101 510 aaPredicted RBP7.84□□□□□ -1.15
VCL-206ENST00000623461 FZD5Q13467 585 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 OR6C3Q9NZP0 311 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 OTOFQ9HC10 1997 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 OR5B21A6NL26 309 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 PRRT4C9JH25 899 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 GCM2O75603 506 aaPredicted RBP7.84□□□□□ -1.15
VCL-206ENST00000623461 B4GALT1P15291 398 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 MRPL54Q6P161 138 aaKnown RBP7.84□□□□□ -1.15
VCL-206ENST00000623461 SCCPDHQ8NBX0 429 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 RNF133Q8WVZ7 376 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 SMIM8Q96KF7 97 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 GPR27Q9NS67 375 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 CES1P1Q9UKY3 287 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 CRYM-AS1A6NIL9 109 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 TNFSF11O14788 317 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 C1orf100Q5SVJ3 147 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 LINC00596Q86U02 117 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 OR4F17Q8NGA8 305 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 TMEM38BQ9NVV0 291 aa7.84□□□□□ -1.15
VCL-206ENST00000623461 TDRD6O60522 2096 aaKnown RBP7.84□□□□□ -1.15
VCL-206ENST00000623461 ANKRD36A6QL64 1941 aa7.84□□□□□ -1.16
VCL-206ENST00000623461 MPZL1O95297 269 aa7.84□□□□□ -1.16
VCL-206ENST00000623461 GALNSP34059 522 aa7.84□□□□□ -1.16
VCL-206ENST00000623461 ZNF506Q5JVG8 444 aa7.84□□□□□ -1.16
VCL-206ENST00000623461 SLC25A34Q6PIV7 304 aa7.84□□□□□ -1.16
VCL-206ENST00000623461 DUSP13Q9UII6 198 aa7.84□□□□□ -1.16
VCL-206ENST00000623461 HCFC2Q9Y5Z7 792 aa7.84□□□□□ -1.16
VCL-206ENST00000623461 LOC390937A0A1W2PQ73 354 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 P01737 135 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 TCL1AP56279 114 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 HERPUD1Q15011 391 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 GALNT14Q96FL9 552 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 MRPL18Q9H0U6 180 aaKnown RBP7.83□□□□□ -1.16
VCL-206ENST00000623461 PIPOXQ9P0Z9 390 aa7.83□□□□□ -1.16
VCL-206ENST00000623461 MTCH2Q9Y6C9 303 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms