RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 RDH5Q92781 318 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 MOB3AQ96BX8 217 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 STARD4Q96DR4 205 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 PLSCR4Q9NRQ2 329 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 OR5AC2Q9NZP5 309 aa18.12■□□□□ 0.49
LIME1-210ENST00000621325 KANTRA0A1W2PQU2 76 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 J3QW42 95 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 WRBO00258 174 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 BCL2L11O43521 198 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 WDR1O75083 606 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 SELEP16581 610 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 LUMP51884 338 aaPredicted RBP18.11■□□□□ 0.49
LIME1-210ENST00000621325 INO80EQ8NBZ0 244 aaPredicted RBP18.11■□□□□ 0.49
LIME1-210ENST00000621325 RTN4IP1Q8WWV3 396 aaPredicted RBP18.11■□□□□ 0.49
LIME1-210ENST00000621325 C2orf50Q96LR7 162 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 TRAV24A0A0B4J272 114 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 GPR37O15354 613 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 LY86O95711 162 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 IGKV3-15P01624 115 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 GLP1RP43220 463 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 ABCA11PQ4W5N1 156 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 OR2A2Q6IF42 318 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 C20orf204Q6ZNR8 217 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 Q6ZS92 163 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 ARL6IP6Q8N6S5 226 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 RELL2Q8NC24 303 aaPredicted RBP18.11■□□□□ 0.49
LIME1-210ENST00000621325 ADAT1Q9BUB4 502 aaKnown RBP18.11■□□□□ 0.49
LIME1-210ENST00000621325 PKIBQ9C010 78 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 SLC2A9Q9NRM0 540 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 C1orf123Q9NWV4 160 aa18.11■□□□□ 0.49
LIME1-210ENST00000621325 TRBV6-7A0A0A0MS04 114 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 H0YL77 283 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 J3QT63 122 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 GPR31O00270 319 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 OR5AC1P0C628 307 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 HOXC12P31275 282 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 IL15RAQ13261 267 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 RAB32Q13637 225 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 RPRMLQ8N4K4 120 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 MRPL24Q96A35 216 aaKnown RBP18.1■□□□□ 0.49
LIME1-210ENST00000621325 RTL8AQ9BWD3 113 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 CGAP01215 116 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 PPYP01298 95 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 CRYBA1P05813 215 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 HERPUD1Q15011 391 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 LDLRAD3Q86YD5 345 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 PDZD9Q8IXQ8 264 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 RBMXL3Q8N7X1 1067 aaKnown RBP18.1■□□□□ 0.49
LIME1-210ENST00000621325 SCCPDHQ8NBX0 429 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 BPIFCQ8NFQ6 507 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 KLF14Q8TD94 323 aaPredicted RBP18.1■□□□□ 0.49
LIME1-210ENST00000621325 PRRX2Q99811 253 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 ZNF471Q9BX82 626 aaPredicted RBP18.1■□□□□ 0.49
LIME1-210ENST00000621325 NAA60Q9H7X0 242 aa18.1■□□□□ 0.49
LIME1-210ENST00000621325 APC2O95996 2303 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 RAC2P15153 192 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 PIK3IP1Q96FE7 263 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 MSGN1A6NI15 193 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 FBP1P09467 338 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 HERV-K104P61576 105 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 FAM76BQ5HYJ3 339 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 PLK3Q9H4B4 646 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 PROCRQ9UNN8 238 aa18.09■□□□□ 0.49
LIME1-210ENST00000621325 ANKRD11Q6UB99 2663 aaPredicted RBP18.09■□□□□ 0.49
LIME1-210ENST00000621325 RP1L1Q8IWN7 2480 aaPredicted RBP18.08■□□□□ 0.49
LIME1-210ENST00000621325 CECR9P0C854 216 aa18.08■□□□□ 0.49
LIME1-210ENST00000621325 UBA52P62987 128 aaKnown RBP18.08■□□□□ 0.49
LIME1-210ENST00000621325 ZNF154Q13106 437 aa18.08■□□□□ 0.49
LIME1-210ENST00000621325 TMEM187Q14656 261 aa18.08■□□□□ 0.49
LIME1-210ENST00000621325 IAH1Q2TAA2 248 aaPredicted RBP18.08■□□□□ 0.49
LIME1-210ENST00000621325 Q6ZS49 121 aa18.08■□□□□ 0.49
LIME1-210ENST00000621325 FOXRED2Q8IWF2 684 aa18.08■□□□□ 0.49
LIME1-210ENST00000621325 C1orf162Q8NEQ5 155 aaPredicted RBP18.08■□□□□ 0.49
LIME1-210ENST00000621325 ZNF71Q9NQZ8 489 aaPredicted RBP18.08■□□□□ 0.49
LIME1-210ENST00000621325 IGKV1-6A0A0C4DH72 117 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 IQCF6A8MYZ5 107 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 CDIPTO14735 213 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 S100A10P60903 97 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 PLEKHN1Q494U1 663 aaPredicted RBP18.08■□□□□ 0.48
LIME1-210ENST00000621325 GGNBP1Q5YKI7 109 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 UNQ6126/PRO20091Q6UXV3 157 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 DMBX1Q8NFW5 382 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 SNIP1Q8TAD8 396 aaKnown RBP18.08■□□□□ 0.48
LIME1-210ENST00000621325 MRPL30Q8TCC3 161 aaKnown RBP18.08■□□□□ 0.48
LIME1-210ENST00000621325 TMEM68Q96MH6 324 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 FZR1Q9UM11 496 aa18.08■□□□□ 0.48
LIME1-210ENST00000621325 A0A1B0GWJ7 208 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 LRP5LA4QPB2 252 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 MBD3L4A6NDZ8 208 aaPredicted RBP18.07■□□□□ 0.48
LIME1-210ENST00000621325 MBD3L3A6NE82 208 aaPredicted RBP18.07■□□□□ 0.48
LIME1-210ENST00000621325 MBD3L5A6NJ08 208 aaPredicted RBP18.07■□□□□ 0.48
LIME1-210ENST00000621325 CLN5O75503 358 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 S100A8P05109 93 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 PRSS54Q6PEW0 395 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 MBD3L2Q8NHZ7 208 aaPredicted RBP18.07■□□□□ 0.48
LIME1-210ENST00000621325 DMXL2Q8TDJ6 3036 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 F5H0A9 414 aaPredicted RBP18.07■□□□□ 0.48
LIME1-210ENST00000621325 ZNF44P15621 663 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 UCP3P55916 312 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 OR2B11Q5JQS5 317 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms