RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 TMEM178AQ8NBL3 297 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 HSD17B11Q8NBQ5 300 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 OR13D1Q8NGV5 346 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 GPER1Q99527 375 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 ZDHHC11Q9H8X9 412 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 PNRC2Q9NPJ4 139 aaKnown RBP8.59□□□□□ -1.03
GGA3-221ENST00000614198 DHHO43323 396 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 SYT7O43581 403 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 MPIG6BO95866 241 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 H2BFMP0C1H6 154 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 FOXF2Q12947 444 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 ABLIM2Q6H8Q1 611 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 ZNF774Q6NX45 483 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 HOGA1Q86XE5 327 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 C2orf50Q96LR7 162 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 TRIB1Q96RU8 372 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 SH3BGRL2Q9UJC5 107 aa8.59□□□□□ -1.03
GGA3-221ENST00000614198 ZNF705GA8MUZ8 300 aaPredicted RBP8.58□□□□□ -1.04
GGA3-221ENST00000614198 K7EPK0 472 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 FGF7P21781 194 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 IGFL2Q6UWQ7 119 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 C20orf196Q8IYI0 205 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 POC1AQ8NBT0 407 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 ADPRHL1Q8NDY3 354 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 TMEM54Q969K7 222 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 G6PC2Q9NQR9 355 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 CADP27708 2225 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 C1QL1O75973 258 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 SFT2D2O95562 160 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 DANCRP0C864 163 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 TBPP20226 339 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 CHATP28329 748 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 EGR3Q06889 387 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 ELOBQ15370 118 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 PEG10Q86TG7 708 aaKnown RBP8.58□□□□□ -1.04
GGA3-221ENST00000614198 OR10J5Q8NHC4 309 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 Q8WTZ3 238 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 HPSE2Q8WWQ2 592 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 PTX4Q96A99 478 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
GGA3-221ENST00000614198 PBDC1Q9BVG4 233 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 OR51B6Q9H340 312 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 A0A087WWC5 75 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 A0A1B0GW64 132 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 SMCO3A2RU48 225 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 A6NNC1 897 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 HSPB2A8KAH6 182 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 EREGO14944 169 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 MRPL33O75394 65 aaKnown RBP8.58□□□□□ -1.04
GGA3-221ENST00000614198 SRSF10O75494 262 aaKnown RBP8.58□□□□□ -1.04
GGA3-221ENST00000614198 HLA-HP01893 362 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 CXCL1P09341 107 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 TMEM11P17152 192 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 LMO1P25800 156 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 FHITP49789 147 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 HNF4GQ14541 408 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 JOSD1Q15040 202 aaPredicted RBP8.58□□□□□ -1.04
GGA3-221ENST00000614198 HSPB2Q16082 182 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 IAH1Q2TAA2 248 aaPredicted RBP8.58□□□□□ -1.04
GGA3-221ENST00000614198 ZNF260Q3ZCT1 412 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 FDX2Q6P4F2 183 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 C5orf24Q7Z6I8 188 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 OR2AE1Q8NHA4 323 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 OR51E1Q8TCB6 317 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 OR10C1Q96KK4 312 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 GOLT1BQ9Y3E0 138 aa8.58□□□□□ -1.04
GGA3-221ENST00000614198 CEACAM4O75871 244 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 AMY2BP19961 511 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 SERPINA2P20848 420 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 CCNOP22674 350 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 FCGR2CP31995 323 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 IGFBP7Q16270 282 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 SOHLH1Q5JUK2 328 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 AKR1C8PQ5T2L2 129 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 DMRTA1Q5VZB9 504 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 KCTD18Q6PI47 426 aaPredicted RBP8.57□□□□□ -1.04
GGA3-221ENST00000614198 FAM57BQ71RH2 274 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 NPRL2Q8WTW4 380 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 RNF133Q8WVZ7 376 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 FGGYQ96C11 551 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 ARV1Q9H2C2 271 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 BANF2Q9H503 90 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 C19orf12Q9NSK7 152 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 HHLA2Q9UM44 414 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 MEMO1Q9Y316 297 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 LOC102725191A0A1B0GVB3 256 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 WIPF3A6NGB9 483 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 ZNF878C9JN71 531 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 SLC33A1O00400 549 aaPredicted RBP8.57□□□□□ -1.04
GGA3-221ENST00000614198 DVL1O14640 695 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 NPSP0C0P6 89 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 ZNF121P58317 390 aaPredicted RBP8.57□□□□□ -1.04
GGA3-221ENST00000614198 FAM189A2Q15884 450 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 PCK2Q16822 640 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 HIKESHIQ53FT3 197 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 GGNBP1Q5YKI7 109 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 OR2T2Q6IF00 324 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 RPUSD3Q6P087 351 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms