RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 NICN1Q9BSH3 213 aa12.86□□□□□ -0.35
LINC00221-201ENST00000603633 RIMS4Q9H426 269 aaPredicted RBP12.86□□□□□ -0.35
LINC00221-201ENST00000603633 ABRACLQ9P1F3 81 aa12.86□□□□□ -0.35
LINC00221-201ENST00000603633 ANK3Q12955 4377 aaKnown RBP12.85□□□□□ -0.35
LINC00221-201ENST00000603633 CLPXO76031 633 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 MT-ND4P03905 459 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 IGHV4-38-2P0DP08 117 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 RPS19P39019 145 aaKnown RBP12.85□□□□□ -0.35
LINC00221-201ENST00000603633 VEGFCP49767 419 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 UBE2E1P51965 193 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 NCS1P62166 190 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 ARL6IP1Q15041 203 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 CTF1Q16619 201 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 SLC16A12Q6ZSM3 486 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 Q6ZTK2 550 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 USP43Q70EL4 1123 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 GAPTQ8N292 157 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 OR13D1Q8NGV5 346 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 RAB2BQ8WUD1 216 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 TNFRSF14Q92956 283 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 SLC25A46Q96AG3 418 aa12.85□□□□□ -0.35
LINC00221-201ENST00000603633 IGHV1-69DA0A0B4J2H0 117 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 KBTBD11-OT1A0A1B0GTJ5 212 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 POM121CA8CG34 1229 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
LINC00221-201ENST00000603633 IGHV1-69P01742 117 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 HOXB4P17483 251 aaPredicted RBP12.84□□□□□ -0.35
LINC00221-201ENST00000603633 GLP1RP43220 463 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 TMBIM6P55061 237 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 TRAT1Q6PIZ9 186 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
LINC00221-201ENST00000603633 TRAPPC2LQ9UL33 140 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 SESN1Q9Y6P5 492 aa12.84□□□□□ -0.35
LINC00221-201ENST00000603633 TEP1Q99973 2627 aaKnown RBP12.84□□□□□ -0.35
LINC00221-201ENST00000603633 A0A0A6YYD4 124 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 A0A0B4J203 849 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 UBE2QL1A1L167 161 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 SOCS1O15524 211 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 C6orf183Q5T699 404 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 C6orf201Q7Z4U5 140 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 ZNF554Q86TJ5 538 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 CLVS1Q8IUQ0 354 aaPredicted RBP12.83□□□□□ -0.35
LINC00221-201ENST00000603633 OR10A7Q8NGE5 316 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 ZNF418Q8TF45 676 aaPredicted RBP12.83□□□□□ -0.35
LINC00221-201ENST00000603633 SUCNR1Q9BXA5 334 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 LINC00574Q9H8X3 128 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 SPATA2Q9UM82 520 aa12.83□□□□□ -0.35
LINC00221-201ENST00000603633 SVEP1Q4LDE5 3571 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 A0A0A6YYJ9 748 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 A6NHS1 94 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 RNASEK-C17orf49H0YIS7 233 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 ORC5O43913 435 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 CGB3P0DN86 165 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 CGB7P0DN87 165 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.36
LINC00221-201ENST00000603633 CDK2P24941 298 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 TGFBR1P36897 503 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 RORCP51449 518 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
LINC00221-201ENST00000603633 RBMS3Q6XE24 437 aaKnown RBP12.83□□□□□ -0.36
LINC00221-201ENST00000603633 OR13A1Q8NGR1 328 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 OR10R2Q8NGX6 335 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 LGALS14Q8TCE9 139 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 MRGPRDQ8TDS7 321 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 PHF21AQ96BD5 680 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 RAB3CQ96E17 227 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 SULT4A1Q9BR01 284 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 FAAP24Q9BTP7 215 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 NAA50Q9GZZ1 169 aaKnown RBP12.83□□□□□ -0.36
LINC00221-201ENST00000603633 ATG5Q9H1Y0 275 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 CALYQ9NYX4 217 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 ZNF69Q9UC07 566 aa12.83□□□□□ -0.36
LINC00221-201ENST00000603633 FN1P02751 2386 aaKnown RBP12.82□□□□□ -0.36
LINC00221-201ENST00000603633 ABCA2Q9BZC7 2435 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 IGHV3OR16-10A0A075B7F0 116 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 MEX3AA1L020 520 aaKnown RBP12.82□□□□□ -0.36
LINC00221-201ENST00000603633 FOXI3A8MTJ6 420 aaPredicted RBP12.82□□□□□ -0.36
LINC00221-201ENST00000603633 EFNB2P52799 333 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 TMEM50BP56557 158 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 MRPS15P82914 257 aaKnown RBP12.82□□□□□ -0.36
LINC00221-201ENST00000603633 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 TMEM30BQ3MIR4 351 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 MIDNQ504T8 468 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 RTN4RL2Q86UN3 420 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 JMJD8Q96S16 334 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 DCSTAMPQ9H295 470 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 KCNIP1Q9NZI2 227 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 MGAT4AQ9UM21 535 aa12.82□□□□□ -0.36
LINC00221-201ENST00000603633 A0A0A6YYH2 397 aa12.81□□□□□ -0.36
LINC00221-201ENST00000603633 A6NJ64 397 aa12.81□□□□□ -0.36
LINC00221-201ENST00000603633 NPIPB11E5RHQ5 1161 aa12.81□□□□□ -0.36
LINC00221-201ENST00000603633 RAB27BO00194 218 aa12.81□□□□□ -0.36
LINC00221-201ENST00000603633 NPFFO15130 113 aa12.81□□□□□ -0.36
LINC00221-201ENST00000603633 SPINT2O43291 252 aa12.81□□□□□ -0.36
LINC00221-201ENST00000603633 PAHP00439 452 aa12.81□□□□□ -0.36
LINC00221-201ENST00000603633 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
LINC00221-201ENST00000603633 ZNF782Q6ZMW2 699 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms