RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 HAVCR2Q8TDQ0 301 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 TNFAIP8L1Q8WVP5 186 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 GPER1Q99527 375 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 NCOR1P1Q9H4R4 102 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 LINC00574Q9H8X3 128 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 AMBNQ9NP70 447 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 ERVK13-1Q9NX77 482 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 GMPPBQ9Y5P6 360 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 TRAV39A0A0B4J263 110 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 SERPINE3A8MV23 424 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 NPIPB11E5RHQ5 1161 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 H3BNX3 289 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 MAGEB3O15480 346 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 FADS2O95864 444 aaKnown RBP10.41□□□□□ -0.74
RPS28-204ENST00000602140 CCDC159P0C7I6 412 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 RAB3AP20336 220 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 SSTR5P35346 364 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 SOX2P48431 317 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 THBS3P49746 956 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 RAB7AP51149 207 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 GBX2P52951 348 aaPredicted RBP10.41□□□□□ -0.74
RPS28-204ENST00000602140 RPL23AP62750 156 aaKnown RBP10.41□□□□□ -0.74
RPS28-204ENST00000602140 MRPL28Q13084 256 aaKnown RBP10.41□□□□□ -0.74
RPS28-204ENST00000602140 IL13RA2Q14627 380 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 RSU1Q15404 277 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 C18orf65Q6ZTR6 163 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 OR8H3Q8N146 312 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 CBR4Q8N4T8 237 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 OR51A2Q8NGJ7 313 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 CHPT1Q8WUD6 406 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 DPF1Q92782 380 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 CPNE2Q96FN4 548 aaPredicted RBP10.41□□□□□ -0.74
RPS28-204ENST00000602140 FAM192AQ9GZU8 254 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 LINC00527Q9UJ94 153 aa10.41□□□□□ -0.74
RPS28-204ENST00000602140 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 A0A1W2PPE3 182 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 NUDT19A8MXV4 375 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 FGF16O43320 207 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 HTR3BO95264 441 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 IGKV1D-33P01593 117 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 IGKV1-33P01594 117 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 KCNJ3P48549 501 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 GTF2A1P52655 376 aaPredicted RBP10.4□□□□□ -0.74
RPS28-204ENST00000602140 PAX5Q02548 391 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 ZNF529Q6P280 563 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 C8orf86Q6ZUL3 223 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 OR2W3Q7Z3T1 314 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 Q8NFD4 153 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 OR10X1Q8NGY0 326 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 RHOXF1Q8NHV9 184 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 Q96MT0 163 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 GPR61Q9BZJ8 451 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 TAS2R4Q9NYW5 299 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 ZNF581Q9P0T4 197 aa10.4□□□□□ -0.74
RPS28-204ENST00000602140 MPZL2O60487 215 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 CDRT1O95170 752 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 RAB40BQ12829 278 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 ASCL4Q6XD76 172 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 SLC16A12Q6ZSM3 486 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 SLC35E3Q7Z769 313 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 SUMF2Q8NBJ7 301 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 KLHL30-AS1Q8NEE0 82 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 OR10A7Q8NGE5 316 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 OR52I1Q8NGK6 324 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 RGP1Q92546 391 aaPredicted RBP10.39□□□□□ -0.75
RPS28-204ENST00000602140 DPCDQ9BVM2 203 aaPredicted RBP10.39□□□□□ -0.75
RPS28-204ENST00000602140 JAM3Q9BX67 310 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 ZFP57Q9NU63 452 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 FAM118AQ9NWS6 357 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 ST3GAL6Q9Y274 331 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 DNAH9Q9NYC9 4486 aa10.39□□□□□ -0.75
RPS28-204ENST00000602140 IGHV3-72A0A0B4J1Y9 119 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 IGHV1-3A0A0C4DH29 117 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 CCRL2O00421 344 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 HSD17B6O14756 317 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 OR7C1O76099 320 aaPredicted RBP10.38□□□□□ -0.75
RPS28-204ENST00000602140 IGHG2P01859 326 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 MYCNOSP40205 109 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 REG1BP48304 166 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 SLC35B1P78383 322 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 CD69Q07108 199 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 ZNF816Q0VGE8 651 aaPredicted RBP10.38□□□□□ -0.75
RPS28-204ENST00000602140 XAF1Q6GPH4 301 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 ZFP1Q6P2D0 407 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 MOB3BQ86TA1 216 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 FOXRED2Q8IWF2 684 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 STPG2Q8N412 459 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 COMMD1Q8N668 190 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 GPR148Q8TDV2 347 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 MCRIP2Q9BUT9 160 aaKnown RBP10.38□□□□□ -0.75
RPS28-204ENST00000602140 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.38□□□□□ -0.75
RPS28-204ENST00000602140 MRPS18AQ9NVS2 196 aaKnown RBP10.38□□□□□ -0.75
RPS28-204ENST00000602140 ING4Q9UNL4 249 aa10.38□□□□□ -0.75
RPS28-204ENST00000602140 LOC100130705A0A1B0GUX0 176 aa10.37□□□□□ -0.75
RPS28-204ENST00000602140 LINC01548A6NM66 108 aa10.37□□□□□ -0.75
RPS28-204ENST00000602140 NCBP2LA6PVI3 153 aaKnown RBP10.37□□□□□ -0.75
RPS28-204ENST00000602140 GEMIN2O14893 280 aaKnown RBP10.37□□□□□ -0.75
RPS28-204ENST00000602140 CSTBP04080 98 aaKnown RBP10.37□□□□□ -0.75
RPS28-204ENST00000602140 GAPDHP04406 335 aaKnown RBP10.37□□□□□ -0.75
RPS28-204ENST00000602140 CD2P06729 351 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms