RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 BARHL1Q9BZE3 327 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 METTL8Q9H825 291 aaKnown RBP11.23□□□□□ -0.61
VRK3-219ENST00000600137 SPACA1Q9HBV2 294 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 ING3Q9NXR8 418 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 DAPK2Q9UIK4 370 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 RAB22AQ9UL26 194 aa11.23□□□□□ -0.61
VRK3-219ENST00000600137 UBE2J1Q9Y385 318 aaPredicted RBP11.23□□□□□ -0.61
VRK3-219ENST00000600137 FBN1P35555 2871 aaKnown RBP11.23□□□□□ -0.61
VRK3-219ENST00000600137 FUOMA2VDF0 154 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 RAB27BO00194 218 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 PAHP00439 452 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 IL1AP01583 271 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 RBP4P02753 201 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 SNRPBP14678 240 aaKnown RBP11.22□□□□□ -0.61
VRK3-219ENST00000600137 EPHA1P21709 976 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 RPL5P46777 297 aaKnown RBP11.22□□□□□ -0.61
VRK3-219ENST00000600137 MOGAT2Q3SYC2 334 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 PLAC9Q5JTB6 97 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 RUSC1-AS1Q66K80 236 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 BAIAP2L2Q6UXY1 529 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 BRD3OSQ6XYD6 125 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 C6orf201Q7Z4U5 140 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 CMTM4Q8IZR5 234 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 TEX29Q8N6K0 151 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 OR5H6Q8NGV6 325 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 C22orf15Q8WYQ4 148 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
VRK3-219ENST00000600137 ZNF714Q96N38 554 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 FAAP24Q9BTP7 215 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 TAS2R3Q9NYW6 316 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 KCNK7Q9Y2U2 307 aa11.22□□□□□ -0.61
VRK3-219ENST00000600137 MEIKINA0A087WXM9 373 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 IGHV1-69DA0A0B4J2H0 117 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 UBE2QL1A1L167 161 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 MCRIP1C9JLW8 97 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 NPIPB11E5RHQ5 1161 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 IGHV1-69P01742 117 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 IGHV1-8P0DP01 117 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 RAB6AP20340 208 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 BLVRBP30043 206 aaPredicted RBP11.21□□□□□ -0.61
VRK3-219ENST00000600137 VEGFCP49767 419 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 HEPN1Q6WQI6 88 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 GPR141Q7Z602 305 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 C5orf24Q7Z6I8 188 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 PDZD9Q8IXQ8 264 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 PNKDQ8N490 385 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 URM1Q9BTM9 101 aaKnown RBP11.21□□□□□ -0.61
VRK3-219ENST00000600137 PRDM13Q9H4Q3 707 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 HSF4Q9ULV5 492 aa11.21□□□□□ -0.61
VRK3-219ENST00000600137 TRGV10A0A0A0MS01 117 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 A0A1W2PPH5 198 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 ZNF729A6NN14 1252 aaPredicted RBP11.2□□□□□ -0.62
VRK3-219ENST00000600137 C15orf65H3BRN8 121 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 NAPSAO96009 420 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 RANBP1P43487 201 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 UBE2E1P51965 193 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 BPIFB3P59826 476 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 RBM39Q14498 530 aaKnown RBP11.2□□□□□ -0.62
VRK3-219ENST00000600137 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 OLFML2AQ68BL7 652 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 ZNF782Q6ZMW2 699 aaPredicted RBP11.2□□□□□ -0.62
VRK3-219ENST00000600137 MRPL30Q8TCC3 161 aaKnown RBP11.2□□□□□ -0.62
VRK3-219ENST00000600137 LGALS14Q8TCE9 139 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 SLC25A46Q96AG3 418 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 SLC25A38Q96DW6 304 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 ARHGAP5-AS1Q96IT6 56 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 PECRQ9BY49 303 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 MBNL3Q9NUK0 354 aaKnown RBP11.2□□□□□ -0.62
VRK3-219ENST00000600137 ETAA1Q9NY74 926 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 OR6C3Q9NZP0 311 aa11.2□□□□□ -0.62
VRK3-219ENST00000600137 TMEM30CPA0ZSE6 113 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 H3BUI4 141 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 CA11O75493 328 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 RCC1P18754 421 aaPredicted RBP11.19□□□□□ -0.62
VRK3-219ENST00000600137 OMGP23515 440 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 CDK2P24941 298 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 SERPINB10P48595 397 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 BLMHQ13867 455 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 NKAPLQ5M9Q1 402 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 IDNKQ5T6J7 187 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 GPR157Q5UAW9 335 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 ZNF880Q6PDB4 577 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 Q6ZTK2 550 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 ZNF565Q8N9K5 539 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 OR11H6Q8NGC7 330 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 OR4K15Q8NH41 348 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 MRGPRDQ8TDS7 321 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 CCDC107Q8WV48 283 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 NEDD4LQ96PU5 975 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 SLC6A7Q99884 636 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 CALYQ9NYX4 217 aa11.19□□□□□ -0.62
VRK3-219ENST00000600137 A0A087X0M5 115 aa11.18□□□□□ -0.62
VRK3-219ENST00000600137 A0A1B0GX30 115 aa11.18□□□□□ -0.62
VRK3-219ENST00000600137 A0A1W2PRD5 423 aa11.18□□□□□ -0.62
VRK3-219ENST00000600137 A0A1W2PRF3 423 aa11.18□□□□□ -0.62
VRK3-219ENST00000600137 A0A1W2PRM7 423 aa11.18□□□□□ -0.62
VRK3-219ENST00000600137 ODF3BA8MYP8 253 aa11.18□□□□□ -0.62
VRK3-219ENST00000600137 TMEM127O75204 238 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms