RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 NEDD4LQ96PU5 975 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 JMJD8Q96S16 334 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 CENPOQ9BU64 300 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 MRPS26Q9BYN8 205 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 NCOR1P1Q9H4R4 102 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 RNF167Q9H6Y7 350 aa16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 SOX21Q9Y651 276 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-214ENST00000597396 AIPO00170 330 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 NPFFO15130 113 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 AIREO43918 545 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 IGHV1-8P0DP01 117 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 SDC2P34741 201 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 PAX5Q02548 391 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 USP43Q70EL4 1123 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 ZNF565Q8N9K5 539 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 TMEM158Q8WZ71 300 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 ZDHHC16Q969W1 377 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 TM2D1Q9BX74 207 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 ETAA1Q9NY74 926 aa16.07■□□□□ 0.16
SHKBP1-214ENST00000597396 ZNF729A6NN14 1252 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 NOTOA8MTQ0 251 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 GLAP06280 429 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 MXD1Q05195 221 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 DEFB112Q30KQ8 113 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 SIGIRRQ6IA17 410 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 HCP5Q6MZN7 132 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 PNKDQ8N490 385 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 OR13A1Q8NGR1 328 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 OR13D1Q8NGV5 346 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 ZNF48Q96MX3 618 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 NICN1Q9BSH3 213 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 LPAR5Q9H1C0 372 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 SESN1Q9Y6P5 492 aa16.06■□□□□ 0.16
SHKBP1-214ENST00000597396 TMEM272A0A1B0GTI8 110 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 MDFIC2A0A1B0GVS7 189 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 UBE2QL1A1L167 161 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 MEIOCA2RUB1 952 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 CDK2P24941 298 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 CFPP27918 469 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 BLVRBP30043 206 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 HILS1P60008 231 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 SRSF2Q01130 221 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 PRAMEF5Q5TYX0 476 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 NR2C2APQ86WQ0 139 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 MRGPRDQ8TDS7 321 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 LIN7BQ9HAP6 207 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 FBLN5Q9UBX5 448 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 RAB22AQ9UL26 194 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 FAM96BQ9Y3D0 163 aa16.05■□□□□ 0.16
SHKBP1-214ENST00000597396 CUBNO60494 3623 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 TRAV39A0A0B4J263 110 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 A0A0U1RQK1 487 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 VENTXO95231 258 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 CLEC2LP0C7M8 214 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 SLC2A2P11168 524 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 CHATP28329 748 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 SAA4P35542 130 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 LGALS4P56470 323 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 LSM3P62310 102 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 BAMBIQ13145 260 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 TUSC1Q2TAM9 212 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 OR52W1Q6IF63 320 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 HEPN1Q6WQI6 88 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 ZNF497Q6ZNH5 498 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 OR13F1Q8NGS4 319 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 CCDC107Q8WV48 283 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 CALYQ9NYX4 217 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 DAPK2Q9UIK4 370 aa16.04■□□□□ 0.16
SHKBP1-214ENST00000597396 A0A0A6YYD4 124 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 A0A0B4J203 849 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 KBTBD11-OT1A0A1B0GTJ5 212 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 LDLRAD4O15165 306 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 CA11O75493 328 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 MMP23AO75900 390 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 PAHP00439 452 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 MT-ND4P03905 459 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 FBP1P09467 338 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 OMGP23515 440 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 VEGFCP49767 419 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 C17orf58Q2M2W7 97 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 MIDNQ504T8 468 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 SFXN4Q6P4A7 337 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 C6orf201Q7Z4U5 140 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 DYRK2Q92630 601 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 FUNDC2Q9BWH2 189 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 TMEM133Q9H2Q1 129 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 PLEKHJ1Q9NW61 149 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 TRAPPC2LQ9UL33 140 aa16.03■□□□□ 0.16
SHKBP1-214ENST00000597396 SOCS1O15524 211 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 IL1AP01583 271 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 ARG1P05089 322 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 DYNC1I2Q13409 638 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 FAM189A2Q15884 450 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 FAM89BQ8N5H3 189 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 OR56B1Q8NGI3 324 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 OR4K15Q8NH41 348 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 SULT4A1Q9BR01 284 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 FAAP24Q9BTP7 215 aa16.02■□□□□ 0.16
SHKBP1-214ENST00000597396 IGHV2-26A0A0B4J1V2 119 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms