RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 PCGF1Q9BSM1 259 aa6.87□□□□□ -1.31
VRK3-211ENST00000596445 METTL8Q9H825 291 aaKnown RBP6.87□□□□□ -1.31
VRK3-211ENST00000596445 UNKLQ9H9P5 680 aaKnown RBP6.87□□□□□ -1.31
VRK3-211ENST00000596445 PLEKHJ1Q9NW61 149 aa6.87□□□□□ -1.31
VRK3-211ENST00000596445 ING3Q9NXR8 418 aa6.87□□□□□ -1.31
VRK3-211ENST00000596445 ETAA1Q9NY74 926 aa6.87□□□□□ -1.31
VRK3-211ENST00000596445 OR6C3Q9NZP0 311 aa6.87□□□□□ -1.31
VRK3-211ENST00000596445 ABRACLQ9P1F3 81 aa6.87□□□□□ -1.31
VRK3-211ENST00000596445 KIF25Q9UIL4 384 aa6.87□□□□□ -1.31
VRK3-211ENST00000596445 HSF4Q9ULV5 492 aa6.87□□□□□ -1.31
VRK3-211ENST00000596445 ANK3Q12955 4377 aaKnown RBP6.87□□□□□ -1.31
VRK3-211ENST00000596445 MEIKINA0A087WXM9 373 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 MEX3AA1L020 520 aaKnown RBP6.86□□□□□ -1.31
VRK3-211ENST00000596445 UBE2QL1A1L167 161 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 C17orf98A8MV24 154 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 H3BMQ9 156 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 RAB27BO00194 218 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 SCGNO76038 276 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 FSHBP01225 129 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 MT-ND4P03905 459 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 CCL3L1P16619 93 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 PRTN3P24158 256 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 SRP14P37108 136 aaKnown RBP6.86□□□□□ -1.31
VRK3-211ENST00000596445 RORCP51449 518 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 DYNC1I2Q13409 638 aaKnown RBP6.86□□□□□ -1.31
VRK3-211ENST00000596445 CHRFAM7AQ494W8 412 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 Q6ZTK2 550 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 IL17RELQ6ZVW7 336 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 VMO1Q7Z5L0 202 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 GAPTQ8N292 157 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 C11orf42Q8N5U0 333 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 OR5H6Q8NGV6 325 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 OR10R2Q8NGX6 335 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 ARHGAP5-AS1Q96IT6 56 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 ZNF714Q96N38 554 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 SULT4A1Q9BR01 284 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 FAAP24Q9BTP7 215 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 PECRQ9BY49 303 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 ATG5Q9H1Y0 275 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 GAL3ST2Q9H3Q3 398 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 RHBDL2Q9NX52 303 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 TAS2R3Q9NYW6 316 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 SPATA2Q9UM82 520 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 CEPT1Q9Y6K0 416 aa6.86□□□□□ -1.31
VRK3-211ENST00000596445 KBTBD11-OT1A0A1B0GTJ5 212 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 ZNF729A6NN14 1252 aaPredicted RBP6.85□□□□□ -1.31
VRK3-211ENST00000596445 CLPXO76031 633 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 CGB3P0DN86 165 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 CGB7P0DN87 165 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 ZNF182P17025 639 aaPredicted RBP6.85□□□□□ -1.31
VRK3-211ENST00000596445 SRD5A1P18405 259 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 GZMHP20718 246 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 SOX6P35712 828 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 GLP1RP43220 463 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 BPIFB3P59826 476 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 SCGB2A2Q13296 93 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 SPCS2Q15005 226 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 MOGAT2Q3SYC2 334 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 KLF17Q5JT82 389 aaPredicted RBP6.85□□□□□ -1.31
VRK3-211ENST00000596445 PLAC9Q5JTB6 97 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 GPR157Q5UAW9 335 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 NCR3LG1Q68D85 454 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 OR13A1Q8NGR1 328 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 ACOT12Q8WYK0 555 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 DYRK2Q92630 601 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 TNFRSF14Q92956 283 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 LHX4Q969G2 390 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 SLC25A38Q96DW6 304 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 RAB3CQ96E17 227 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 RBM38Q9H0Z9 239 aaKnown RBP6.85□□□□□ -1.31
VRK3-211ENST00000596445 HEXA-AS1Q9H8Q6 139 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 LINC00574Q9H8X3 128 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 SIRT7Q9NRC8 400 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 NUP50Q9UKX7 468 aa6.85□□□□□ -1.31
VRK3-211ENST00000596445 A0A0A6YYH2 397 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 TRAV40A0A0B4J280 105 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 CENPVL3A0A0U1RRI6 287 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 CCDC160A6NGH7 325 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 A6NJ64 397 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 POM121CA8CG34 1229 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 RNASEK-C17orf49H0YIS7 233 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 ZNF701M0R085 212 aaPredicted RBP6.84□□□□□ -1.31
VRK3-211ENST00000596445 ORC5O43913 435 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 NAPSAO96009 420 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 FAM157CP0CG43 387 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 IGHV1-8P0DP01 117 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 IGHV4-38-2P0DP08 117 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 HIST1H1DP16402 221 aaKnown RBP6.84□□□□□ -1.31
VRK3-211ENST00000596445 HOXB4P17483 251 aaPredicted RBP6.84□□□□□ -1.31
VRK3-211ENST00000596445 CDK2P24941 298 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 DLX1P56177 255 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 ERVFRD-1P60508 538 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 GUCA2AQ02747 115 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 ARL6IP1Q15041 203 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 UBE2NLQ5JXB2 153 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 C6orf183Q5T699 404 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 OR52W1Q6IF63 320 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 TRAT1Q6PIZ9 186 aa6.84□□□□□ -1.31
VRK3-211ENST00000596445 HEPN1Q6WQI6 88 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms