RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 LIN7BQ9HAP6 207 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 TAS2R3Q9NYW6 316 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 RAB22AQ9UL26 194 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 SOX21Q9Y651 276 aaPredicted RBP11.75□□□□□ -0.53
LIG1-208ENST00000595758 DSCAML1Q8TD84 2053 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 TMEM272A0A1B0GTI8 110 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 LDLRAD4O15165 306 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 GLP1RP43220 463 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 UBE2E1P51965 193 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 HCP5Q6MZN7 132 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 RBMS3Q6XE24 437 aaKnown RBP11.74□□□□□ -0.53
LIG1-208ENST00000595758 ZNF782Q6ZMW2 699 aaPredicted RBP11.74□□□□□ -0.53
LIG1-208ENST00000595758 ETAA1Q9NY74 926 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 DAPK2Q9UIK4 370 aa11.74□□□□□ -0.53
LIG1-208ENST00000595758 A0A0A6YYD4 124 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 A0A0B4J203 849 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 UBE2QL1A1L167 161 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 NPFFO15130 113 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 TCF21O43680 179 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 CA11O75493 328 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 CLPXO76031 633 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 MT-ND4P03905 459 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 TFAP2AP05549 437 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 COX7A1P24310 79 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 CHATP28329 748 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 BLVRBP30043 206 aaPredicted RBP11.73□□□□□ -0.53
LIG1-208ENST00000595758 ALDH3B2P48448 385 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 SFXN4Q6P4A7 337 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 ZNF497Q6ZNH5 498 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 FAM89BQ8N5H3 189 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 MRGPRDQ8TDS7 321 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 SESN1Q9Y6P5 492 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 ATRQ13535 2644 aa11.73□□□□□ -0.53
LIG1-208ENST00000595758 A0A0A6YYJ9 748 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 TRAV39A0A0B4J263 110 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 KBTBD11-OT1A0A1B0GTJ5 212 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 ZNF729A6NN14 1252 aaPredicted RBP11.72□□□□□ -0.53
LIG1-208ENST00000595758 SOCS1O15524 211 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 MMP23AO75900 390 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 CGB3P0DN86 165 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 CGB7P0DN87 165 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 RAB6AP20340 208 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 GZMHP20718 246 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 CDK2P24941 298 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 TGFBR1P36897 503 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 VEGFCP49767 419 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 EFNB2P52799 333 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 PLA2G7Q13093 441 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 FAM189A2Q15884 450 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 C17orf58Q2M2W7 97 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 DEFB112Q30KQ8 113 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 PRAMEF5Q5TYX0 476 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 HEPN1Q6WQI6 88 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 USP43Q70EL4 1123 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 C6orf201Q7Z4U5 140 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 GPR141Q7Z602 305 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 PNKDQ8N490 385 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 OR56B1Q8NGI3 324 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 OR13D1Q8NGV5 346 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 CCDC107Q8WV48 283 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 SULT4A1Q9BR01 284 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 FAAP24Q9BTP7 215 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 PLEKHJ1Q9NW61 149 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 CALYQ9NYX4 217 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 FAM96BQ9Y3D0 163 aa11.72□□□□□ -0.53
LIG1-208ENST00000595758 MEIOCA2RUB1 952 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 OMGP23515 440 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 MIDNQ504T8 468 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 IDNKQ5T6J7 187 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 GPR107Q5VW38 600 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 OR52W1Q6IF63 320 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 ANKRD13BQ86YJ7 626 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 GAPTQ8N292 157 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 DYRK2Q92630 601 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 ZDHHC16Q969W1 377 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 PTX4Q96A99 478 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 CYYR1Q96J86 154 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 ZNF48Q96MX3 618 aaPredicted RBP11.71□□□□□ -0.53
LIG1-208ENST00000595758 JMJD8Q96S16 334 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 TRAPPC2LQ9UL33 140 aa11.71□□□□□ -0.53
LIG1-208ENST00000595758 A0A0U1RQK1 487 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 MDFIC2A0A1B0GVS7 189 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 METTL21EPA6NDL7 271 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 FOXI3A8MTJ6 420 aaPredicted RBP11.7□□□□□ -0.54
LIG1-208ENST00000595758 IL1AP01583 271 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 SNRPBP14678 240 aaKnown RBP11.7□□□□□ -0.54
LIG1-208ENST00000595758 SAA4P35542 130 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 RPS19P39019 145 aaKnown RBP11.7□□□□□ -0.54
LIG1-208ENST00000595758 HILS1P60008 231 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 NCS1P62166 190 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms