RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PMP22Q01453 160 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 HNF4GQ14541 408 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 MCEMP1Q8IX19 187 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 HAS2Q92819 552 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 TMEM230Q96A57 120 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 OR10C1Q96KK4 312 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 NUDT16L1Q9BRJ7 211 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 METTL8Q9H825 291 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 UNKLQ9H9P5 680 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 HLA-HP01893 362 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 HIST1H1DP16402 221 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 MTCP1P56278 107 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 ZNF92Q03936 586 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 SOHLH1Q5JUK2 328 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 RPUSD3Q6P087 351 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 NAXEQ8NCW5 288 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 APH1AQ96BI3 265 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 URM1Q9BTM9 101 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 FBXL17Q9UF56 701 aa14.72□□□□□ -0.05
SHKBP1-205ENST00000594973 K7EPK0 472 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 TGOLN2O43493 480 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 RAD51DO75771 328 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 SFTPBP07988 381 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 CCL2P13500 99 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 FGF7P21781 194 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 ELOBQ15370 118 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 KRTAP27-1Q3LI81 207 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 Q6ZSR3 168 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 FAM71E2Q8N5Q1 922 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 C10orf35Q96D05 121 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 C5orf66Q9H5L9 145 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 SIRT7Q9NRC8 400 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 WT1P19544 449 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 FCGR2CP31995 323 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 S100A10P60903 97 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 TCF15Q12870 199 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 VAX1Q5SQQ9 334 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 SLC22A25Q6T423 547 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 NUFIP2Q7Z417 695 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 LINC00470Q9BZP3 86 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 C12orf49Q9H741 205 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 MMP24Q9Y5R2 645 aa14.71□□□□□ -0.05
SHKBP1-205ENST00000594973 TMEM225BP0DP42 221 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 CAMLGP49069 296 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 ZNF616Q08AN1 781 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 SLC9A3R2Q15599 337 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 ZNF100Q8IYN0 542 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 SUMF2Q8NBJ7 301 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 FDCSPQ8NFU4 85 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 OR4K15Q8NH41 348 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 HPSE2Q8WWQ2 592 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 C19orf12Q9NSK7 152 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 SPRR3Q9UBC9 169 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 TRGV5A0A0B4J1U4 118 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 SMCO3A2RU48 225 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 DVL1O14640 695 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 SPRY1O43609 319 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 ANGPTL7O43827 346 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 FPR2P25090 351 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 IL2RGP31785 369 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 TNFSF10P50591 281 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 TNFRSF9Q07011 255 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 ANKRD55Q3KP44 614 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 TMEM178AQ8NBL3 297 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 Q8WTZ3 238 aa14.7□□□□□ -0.06
SHKBP1-205ENST00000594973 ZNF503-AS2A6NEH8 195 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 GSTP1P09211 210 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 EDN3P14138 238 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 FABP4P15090 132 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 BLVRBP30043 206 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 TMEM33P57088 247 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 SUPT4H1P63272 117 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 ARFRP1Q13795 201 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 JOSD1Q15040 202 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 RNPS1Q15287 305 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 AKR1C8PQ5T2L2 129 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 PEG10Q86TG7 708 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 PACRGQ96M98 296 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 SUCNR1Q9BXA5 334 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 PLEKHA2Q9HB19 425 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 ANAPC10Q9UM13 185 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 PUS1Q9Y606 427 aaKnown RBP eCLIP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 DOCK7Q96N67 2140 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 IGKV1-27A0A075B6S5 117 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 FIGNL2A6NMB9 653 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 OR13C7P0DN81 318 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 ALDH3B1P43353 468 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 HIKESHIQ53FT3 197 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 GFI1BQ5VTD9 330 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 RNASEH2CQ8TDP1 164 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 GINS3Q9BRX5 216 aa14.69□□□□□ -0.06
SHKBP1-205ENST00000594973 C5orf49A4QMS7 147 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 DHRS7CA6NNS2 312 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 NRASP01111 189 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 CRYABP02511 175 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 CXCL1P09341 107 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 GABRR1P24046 479 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 NRN1LQ496H8 165 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 OR2T2Q6IF00 324 aa14.68□□□□□ -0.06
SHKBP1-205ENST00000594973 SPSB1Q96BD6 273 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms