RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RND2P52198 227 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 SPIN3Q5JUX0 258 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 SLC25A26Q70HW3 274 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 GAPTQ8N292 157 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 SPEM1Q8N4L4 309 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 SUMF1Q8NBK3 374 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 P4HTMQ9NXG6 502 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 CISD1Q9NZ45 108 aaKnown RBP11.37□□□□□ -0.59
VRK3-209ENST00000594948 RNF115Q9Y4L5 304 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 MMP24Q9Y5R2 645 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 RTTNQ86VV8 2226 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 NCKAP5O14513 1909 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 A0A1B0GU03 582 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 YIF1AO95070 293 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 TMEM50AO95807 157 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 UMODP07911 640 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 OMGP23515 440 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 S100GP29377 79 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 NTF4P34130 210 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 PAX9P55771 341 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 CARD18P57730 90 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 RPL23AP62750 156 aaKnown RBP11.37□□□□□ -0.59
VRK3-209ENST00000594948 CEACAM16Q2WEN9 425 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 PYY3Q5JQD4 70 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 LINC00596Q86U02 117 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 GGNQ86UU5 652 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 RPS19BP1Q86WX3 136 aaKnown RBP11.37□□□□□ -0.59
VRK3-209ENST00000594948 STX12Q86Y82 276 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 SGCZQ96LD1 299 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 BCL2L14Q9BZR8 327 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 GPR35Q9HC97 309 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 ATP23Q9Y6H3 246 aa11.37□□□□□ -0.59
VRK3-209ENST00000594948 LRP5LA4QPB2 252 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 CHST1O43916 411 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 IFNA5P01569 189 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 EPHA1P21709 976 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 LBX1P52954 281 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 ERVFRD-1P60508 538 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 MBD3L1Q8WWY6 194 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 TMEM45BQ96B21 275 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
VRK3-209ENST00000594948 P2RX4Q99571 388 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
VRK3-209ENST00000594948 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 AKIRIN1Q9H9L7 192 aaPredicted RBP11.36□□□□□ -0.59
VRK3-209ENST00000594948 TAAR3PQ9P1P4 343 aa11.36□□□□□ -0.59
VRK3-209ENST00000594948 MRPS18CQ9Y3D5 142 aaKnown RBP11.36□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BKO60814 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 CST7O76096 145 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BJP06899 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 SCTP09683 121 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 BCL3P20749 454 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BOP23527 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BBP33778 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BDP58876 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BCP62807 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 ZNF154Q13106 437 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 PMS2P11Q13670 270 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HERPUD1Q15011 391 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST2H2BEQ16778 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 C1orf87Q8N0U7 546 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 OR2V1Q8NHB1 315 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 NAT6Q93015 286 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BHQ93079 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 RCC1LQ96I51 464 aaKnown RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 ADGRG7Q96K78 797 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 ALKBH3Q96Q83 286 aaPredicted RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BNQ99877 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST1H2BMQ99879 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 PARD6GQ9BYG4 376 aaPredicted RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 CALHM2Q9HA72 323 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 OCIAD1Q9NX40 245 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HS3ST3B1Q9Y662 390 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 IGKV1D-13A0A0B4J2D9 117 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 PGLYRP1O75594 196 aaPredicted RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 PTBP3O95758 552 aaKnown RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 CYB5R3P00387 301 aaPredicted RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 KLK3P07288 261 aaPredicted RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 PATE4P0C8F1 98 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 IGKV1-13P0DP09 117 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 F2RP25116 425 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 NKX6-1P78426 367 aaPredicted RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 RUNX1Q01196 453 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 PDCD1Q15116 288 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 FAM90A2PQ658T7 463 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 ZNF343Q6P1L6 599 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 MKXQ8IYA7 352 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 HIST3H2BBQ8N257 126 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 NAXEQ8NCW5 288 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 AGBL5Q8NDL9 886 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 FGFBP3Q8TAT2 258 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 REPIN1Q9BWE0 567 aaKnown RBP11.35□□□□□ -0.59
VRK3-209ENST00000594948 PLK3Q9H4B4 646 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 CCL28Q9NRJ3 127 aa11.35□□□□□ -0.59
VRK3-209ENST00000594948 CABIN1Q9Y6J0 2220 aa11.34□□□□□ -0.59
VRK3-209ENST00000594948 TGIF2-C20orf24A0A0A6YYL0 155 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms