RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 TMEM89A2RUT3 159 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 SLC17A2O00624 439 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 MPIG6BO95866 241 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 VSIG8P0DPA2 414 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 GALP22466 123 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 OMGP23515 440 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 GDNFP39905 211 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 LGALS4P56470 323 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 OR52W1Q6IF63 320 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 OR10K2Q6IF99 312 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 C16orf87Q6PH81 154 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 BRICD5Q6PL45 260 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 BAIAP2L2Q6UXY1 529 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 ZNF565Q8N9K5 539 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 GCDHQ92947 438 aaPredicted RBP11.83□□□□□ -0.52
VRK3-206ENST00000594090 DPAGT1Q9H3H5 408 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 KCNK15Q9H427 330 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 PLGRKTQ9HBL7 147 aa11.83□□□□□ -0.52
VRK3-206ENST00000594090 TRAV1-2A0A0B4J238 106 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 KBTBD11-OT1A0A1B0GTJ5 212 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 TMEM30CPA0ZSE6 113 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 TMEM14DPA8MWL7 114 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 BPNT1O95861 308 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 CGB3P0DN86 165 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 CGB7P0DN87 165 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 HKR1P10072 659 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 QRFPP83859 136 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 DYNC1I2Q13409 638 aaKnown RBP11.82□□□□□ -0.52
VRK3-206ENST00000594090 UNC119Q13432 240 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 SIGIRRQ6IA17 410 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 RAB12Q6IQ22 244 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 ZNF497Q6ZNH5 498 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 LHFPL4Q7Z7J7 247 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 MRGPRDQ8TDS7 321 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 CLEC7AQ9BXN2 247 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 TMEM59Q9BXS4 323 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 MEGF9Q9H1U4 602 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 CALYQ9NYX4 217 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 TBL2Q9Y4P3 447 aaKnown RBP11.82□□□□□ -0.52
VRK3-206ENST00000594090 PEX16Q9Y5Y5 336 aa11.82□□□□□ -0.52
VRK3-206ENST00000594090 TRAV39A0A0B4J263 110 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 SHISA3A0PJX4 238 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 FAM172BPA6NC97 362 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 BTBD17A6NE02 478 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 MCRIP1C9JLW8 97 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 IL1AP01583 271 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 MYL9P24844 172 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 PAX6P26367 422 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 SSTR5P35346 364 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 COMPP49747 757 aaPredicted RBP11.81□□□□□ -0.52
VRK3-206ENST00000594090 RPS27AP62979 156 aaKnown RBP11.81□□□□□ -0.52
VRK3-206ENST00000594090 RBM39Q14498 530 aaKnown RBP11.81□□□□□ -0.52
VRK3-206ENST00000594090 P2RY14Q15391 338 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 NEDD8Q15843 81 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 RAB11BQ15907 218 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 LDLRAD2Q5SZI1 272 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 C22orf42Q6IC83 251 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 KCNG3Q8TAE7 436 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 VPREB3Q9UKI3 123 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 STUB1Q9UNE7 303 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 V9GY05 133 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 COL6A5A8TX70 2615 aa11.81□□□□□ -0.52
VRK3-206ENST00000594090 A0A087X0M5 115 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 A0A1B0GX30 115 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 AIPO00170 330 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 PDCD6O75340 191 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 TNFAIP8O95379 198 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 FUT3P21217 361 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 CD34P28906 385 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 PSMD7P51665 324 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 OR10A3P58181 314 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 LRRC75BQ2VPJ9 315 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 SYT6Q5T7P8 510 aaPredicted RBP11.8□□□□□ -0.52
VRK3-206ENST00000594090 OR2W3Q7Z3T1 314 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 ABHD12Q8N2K0 398 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 DYRK2Q92630 601 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 KIRREL1Q96J84 757 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 CYYR1Q96J86 154 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 SSX3Q99909 188 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 TM2D1Q9BX74 207 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 LINC00574Q9H8X3 128 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 ZNF286AQ9HBT8 521 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 ETAA1Q9NY74 926 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 IDI2-AS1Q9NZ38 188 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 KIAA2026Q5HYC2 2103 aa11.8□□□□□ -0.52
VRK3-206ENST00000594090 NPIPB11E5RHQ5 1161 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 H3BUI4 141 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 H3BUX3 64 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 PDCD5O14737 125 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 GPR137BO60478 399 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 MT-ND4P03905 459 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 GLAP06280 429 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 ARSBP15848 533 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 NFYBP25208 207 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 CHATP28329 748 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 FGF9P31371 208 aaPredicted RBP11.79□□□□□ -0.52
VRK3-206ENST00000594090 CLDN12P56749 244 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 RPL15P61313 204 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms