RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 CNTNAP3BQ96NU0 1288 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 CNTNAP3Q9BZ76 1288 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 TMEM100Q9NV29 134 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 FBXO9Q9UK97 447 aaPredicted RBP13.32□□□□□ -0.28
CNN1-210ENST00000592923 FAM215AQ9Y5M1 114 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 IGHV1-18A0A0C4DH31 117 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 IGKV1-6A0A0C4DH72 117 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 H7C1Q1 480 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 HS3ST1O14792 307 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 ATF4P18848 351 aaPredicted RBP13.32□□□□□ -0.28
CNN1-210ENST00000592923 ZNF146Q15072 292 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 SP6Q3SY56 376 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 DNTTIP1Q9H147 329 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 ZC4H2Q9NQZ6 224 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 SLC25A15Q9Y619 301 aa13.32□□□□□ -0.28
CNN1-210ENST00000592923 ASPMQ8IZT6 3477 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 MSGN1A6NI15 193 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 GPR31O00270 319 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 SLC33A1O00400 549 aaPredicted RBP13.31□□□□□ -0.28
CNN1-210ENST00000592923 MPPED1O15442 326 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 PHF1O43189 567 aaPredicted RBP13.31□□□□□ -0.28
CNN1-210ENST00000592923 MLNRO43193 412 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 KCNAB3O43448 404 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 NXPH2O95156 264 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 GNRHRP30968 328 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 SMCO1Q147U7 214 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 PAN3Q58A45 887 aaKnown RBP13.31□□□□□ -0.28
CNN1-210ENST00000592923 MBNL2Q5VZF2 373 aaKnown RBP13.31□□□□□ -0.28
CNN1-210ENST00000592923 FIP1L1Q6UN15 594 aaKnown RBP13.31□□□□□ -0.28
CNN1-210ENST00000592923 GAPTQ8N292 157 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 ZNF565Q8N9K5 539 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 GLYATL2Q8WU03 294 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 LINC00052Q96N35 136 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 CXXC4Q9H2H0 198 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 HES4Q9HCC6 221 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 PCDHB10Q9UN67 800 aa13.31□□□□□ -0.28
CNN1-210ENST00000592923 NPIPB11E5RHQ5 1161 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 H0YL77 283 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 MKRN2OSH3BPM6 223 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 K7EM74 188 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 CDIPTO14735 213 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 TIMM8AO60220 97 aaPredicted RBP13.3□□□□□ -0.28
CNN1-210ENST00000592923 DEDDO75618 318 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 OR2H2O95918 312 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 TPT1P13693 172 aaKnown RBP13.3□□□□□ -0.28
CNN1-210ENST00000592923 TIMP3P35625 211 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 SNTB1Q13884 538 aaKnown RBP13.3□□□□□ -0.28
CNN1-210ENST00000592923 ZNF273Q14593 569 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 C20orf204Q6ZNR8 217 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.3□□□□□ -0.28
CNN1-210ENST00000592923 BVESQ8NE79 360 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 SPENQ96T58 3664 aaKnown RBP13.3□□□□□ -0.28
CNN1-210ENST00000592923 TLNRD1Q9H1K6 362 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 TINAGQ9UJW2 476 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 GTF3C1Q12789 2109 aa13.3□□□□□ -0.28
CNN1-210ENST00000592923 C3orf85A0A1B0GTC6 90 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 TOR1AO14656 332 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 ZNF718Q3SXZ3 478 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 KRTCAP3Q53RY4 240 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 PCSK4Q6UW60 755 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 ZNF497Q6ZNH5 498 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 RELL2Q8NC24 303 aaPredicted RBP13.29□□□□□ -0.28
CNN1-210ENST00000592923 SECTM1Q8WVN6 248 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 TP53RKQ96S44 253 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 DMRTA2Q96SC8 542 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 SFXN3Q9BWM7 321 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 SLC5A7Q9GZV3 580 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 CYTL1Q9NRR1 136 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 WASF3Q9UPY6 502 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 TMED3Q9Y3Q3 217 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 IGKV1D-13A0A0B4J2D9 117 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 A0A1B0GWJ7 208 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 C3orf80F5H4A9 247 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 SIRPB1O00241 398 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 GRPP07492 148 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 IGKV1-13P0DP09 117 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 C3orf36Q3SXR2 165 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 FAM74A1Q5RGS3 127 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 FAM180AQ6UWF9 173 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 ZNF818PQ6ZRF7 136 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 LYZL2Q7Z4W2 148 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 TBC1D26Q86UD7 250 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 H1FOOQ8IZA3 346 aaPredicted RBP13.29□□□□□ -0.28
CNN1-210ENST00000592923 TMEM222Q9H0R3 208 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 ZFP57Q9NU63 452 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
CNN1-210ENST00000592923 SH2D1BO14796 132 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 TSPAN4O14817 238 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 GCH1P30793 250 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 TUSC1Q2TAM9 212 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 C5orf24Q7Z6I8 188 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 FAM219AQ8IW50 185 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 PLPPR1Q8TBJ4 325 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 FAM57AQ8TBR7 257 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 KIRREL1Q96J84 757 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 TMEM56Q96MV1 263 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 TMEM56-RWDD3S4R434 201 aa13.28□□□□□ -0.28
CNN1-210ENST00000592923 TAAR5O14804 337 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms