RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TMEM42Q69YG0 159 aa12.51□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF474Q6S9Z5 364 aaPredicted RBP12.51□□□□□ -0.41
CCDC43-203ENST00000588210 LRTM2Q8N967 370 aa12.51□□□□□ -0.41
CCDC43-203ENST00000588210 TMEM38BQ9NVV0 291 aa12.51□□□□□ -0.41
CCDC43-203ENST00000588210 PARPBPQ9NWS1 579 aa12.51□□□□□ -0.41
CCDC43-203ENST00000588210 USP9YO00507 2555 aaPredicted RBP12.51□□□□□ -0.41
CCDC43-203ENST00000588210 RTTNQ86VV8 2226 aa12.51□□□□□ -0.41
CCDC43-203ENST00000588210 FAM230AA0A1W2PPH8 454 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 OR6C6A6NF89 314 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 SPRY1O43609 319 aaPredicted RBP12.5□□□□□ -0.41
CCDC43-203ENST00000588210 MRPL33O75394 65 aaKnown RBP12.5□□□□□ -0.41
CCDC43-203ENST00000588210 FARS2O95363 451 aaKnown RBP12.5□□□□□ -0.41
CCDC43-203ENST00000588210 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF728P0DKX0 622 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 RBP2P50120 134 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 PIGPP57054 158 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 TMEM33P57088 247 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 FAM3AP98173 230 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 TMEM187Q14656 261 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF774Q6NX45 483 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF100Q8IYN0 542 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 UBAC2Q8NBM4 344 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 LYPD6BQ8NI32 183 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 TMEM45BQ96B21 275 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 SULT4A1Q9BR01 284 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 ARV1Q9H2C2 271 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 IL36GQ9NZH8 169 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 PLA2G2EQ9NZK7 142 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF391Q9UJN7 358 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 KCNIP3Q9Y2W7 256 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 LSM5Q9Y4Y9 91 aaKnown RBP12.5□□□□□ -0.41
CCDC43-203ENST00000588210 FAM157AC9JC47 383 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 E5RGE8 158 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 CNOT4O95628 575 aaKnown RBP12.5□□□□□ -0.41
CCDC43-203ENST00000588210 IGFBP2P18065 325 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 Q6ZRG5 221 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 APH1AQ96BI3 265 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 BORCS8Q96FH0 119 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 SPOCK3Q9BQ16 436 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 NSG2Q9Y328 171 aa12.5□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF850A8MQ14 1090 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 NTF4P34130 210 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 SUCNR1Q9BXA5 334 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 RGCCQ9H4X1 137 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF581Q9P0T4 197 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 SPTAN1Q13813 2472 aaKnown RBP12.49□□□□□ -0.41
CCDC43-203ENST00000588210 ADGRG4Q8IZF6 3080 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 H7C1Q1 480 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 LCATP04180 440 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 OR5AC1P0C628 307 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF32P17041 273 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 PRKACAP17612 351 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 COL8A1P27658 744 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 DVL1P1P54792 670 aaPredicted RBP12.49□□□□□ -0.41
CCDC43-203ENST00000588210 FAM27E3Q08E93 113 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 ABCA11PQ4W5N1 156 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 SKA3Q8IX90 412 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 DMRTC2Q8IXT2 367 aaPredicted RBP12.49□□□□□ -0.41
CCDC43-203ENST00000588210 OR10AD1Q8NGE0 317 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 RTN4IP1Q8WWV3 396 aaPredicted RBP12.49□□□□□ -0.41
CCDC43-203ENST00000588210 TOMM40LQ969M1 308 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 MARS2Q96GW9 593 aaKnown RBP12.49□□□□□ -0.41
CCDC43-203ENST00000588210 CRLF2Q9HC73 371 aa12.49□□□□□ -0.41
CCDC43-203ENST00000588210 SCGB1D2O95969 90 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 MBPP02686 304 aaPredicted RBP12.48□□□□□ -0.41
CCDC43-203ENST00000588210 HOXA1P49639 335 aaPredicted RBP12.48□□□□□ -0.41
CCDC43-203ENST00000588210 RAB13P51153 203 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 Q6ZT83 130 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 OSR2Q8N2R0 312 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 ERGIC1Q969X5 290 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 C18orf12Q96KH6 178 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 PRSS50Q9UI38 385 aa12.48□□□□□ -0.41
CCDC43-203ENST00000588210 IGKV1-12A0A0C4DH73 117 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 hCG_38984A0A1B0GV85 526 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 NRASP01111 189 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 IGKV1D-12P01611 117 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 PAX6P26367 422 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 CD80P33681 288 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 HTR5AP47898 357 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 UCP3P55916 312 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 OR8B8Q15620 311 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 SWI5Q1ZZU3 235 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 FBXW9Q5XUX1 488 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 SLC22A25Q6T423 547 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 MEX3BQ6ZN04 569 aaKnown RBP12.47□□□□□ -0.41
CCDC43-203ENST00000588210 MOB3AQ96BX8 217 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 KIRREL1Q96J84 757 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 SMIM3Q9BZL3 60 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 ZNF286AQ9HBT8 521 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 SLC2A9Q9NRM0 540 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 FAM212BQ9NTI7 297 aaPredicted RBP12.47□□□□□ -0.41
CCDC43-203ENST00000588210 C16orf97H3BN30 126 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 GEMIN2O14893 280 aaKnown RBP12.47□□□□□ -0.41
CCDC43-203ENST00000588210 GPR137BO60478 399 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 OR8U9P0C7N5 309 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 SEC11BP0C7V7 166 aa12.47□□□□□ -0.41
CCDC43-203ENST00000588210 COX6B1P14854 86 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms