RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TRBV5-5A0A0J9YX44 114 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 CALCBP10092 127 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 IGFBP3P17936 291 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 FSTP19883 344 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 RBM11P57052 281 aaKnown RBP11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 PPP3R1P63098 170 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 SCN1BQ07699 218 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 ATXN7L3Q14CW9 347 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 YIF1BQ5BJH7 314 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 ARSJQ5FYB0 599 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 DMKNQ6E0U4 476 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 CENPVQ7Z7K6 275 aaPredicted RBP11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 C1QL4Q86Z23 238 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 OSR2Q8N2R0 312 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 LINC00311Q8N616 119 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 ZNF485Q8NCK3 441 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 SETD9Q8NE22 299 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 OR4X2Q8NGF9 303 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 RPEQ96AT9 228 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 GPER1Q99527 375 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 METTL9Q9H1A3 318 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 PPIL3Q9H2H8 161 aaKnown RBP11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 RAB9BQ9NP90 201 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 IDI2-AS1Q9NZ38 188 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 KIF25Q9UIL4 384 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
SMARCE1-216ENST00000580419 CCRL2O00421 344 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 ORC5O43913 435 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 CA11O75493 328 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 GLAP06280 429 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 JUNBP17275 347 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 MYL12AP19105 171 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 BDKRB2P30411 391 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 ZNF93P35789 620 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 GTF2A1P52655 376 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 TAS2R43P59537 309 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 ZNF816Q0VGE8 651 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 NSUN5P1Q3KNT7 163 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 STEAP3Q658P3 488 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 BAIAP2L2Q6UXY1 529 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 GAPTQ8N292 157 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 COMMD1Q8N668 190 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 OR51A2Q8NGJ7 313 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 OR13A1Q8NGR1 328 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 TOMM40LQ969M1 308 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 DPCDQ9BVM2 203 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 PSG11Q9UQ72 335 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 ST3GAL6Q9Y274 331 aa11.54□□□□□ -0.56
SMARCE1-216ENST00000580419 A0A1W2PPI3 338 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 FAM90A10PA6NDY2 464 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 FAM90A7PA6NKC0 464 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 FAM90A23PA8MXZ1 464 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 CSTBP04080 98 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 GLP1RP43220 463 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 ETV1P50549 477 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 Q499Y3 187 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 ABCA11PQ4W5N1 156 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 TCTEX1D4Q5JR98 221 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 ZNF554Q86TJ5 538 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 SUMF2Q8NBJ7 301 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 CHPT1Q8WUD6 406 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 S100A13Q99584 98 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 GPR61Q9BZJ8 451 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 CHCHD3Q9NX63 227 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 CNOT2Q9NZN8 540 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 RCC2Q9P258 522 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 CKLFQ9UBR5 152 aa11.53□□□□□ -0.56
SMARCE1-216ENST00000580419 TMEM30CPA0ZSE6 113 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 LPLP06858 475 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 GTF2F2P13984 249 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 NFYBP25208 207 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 OR3A4PP47883 348 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 ZNF137PP52743 207 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 RIPK1Q13546 671 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 PIGYQ3MUY2 71 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 DDI2Q5TDH0 399 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 XAF1Q6GPH4 301 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 Q6ZPA2 131 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 IZUMO1Q8IYV9 350 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 OR8H1Q8NGG4 311 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 PLPPR1Q8TBJ4 325 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 GHSRQ92847 366 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 TMEM80Q96HE8 168 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 ZFP57Q9NU63 452 aa11.52□□□□□ -0.57
SMARCE1-216ENST00000580419 TRBV5-7A0A0A0MS05 114 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 TCRBV4S1A1TA0A5B7 111 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 EFCAB10A6NFE3 127 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 C15orf65H3BRN8 121 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 TXNL1O43396 289 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 OR7C1O76099 320 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 HTR3BO95264 441 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 CLIC3O95833 236 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 IGHG2P01859 326 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 SOX2P48431 317 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 LOXL3P58215 753 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 RPS11P62280 158 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 SLC35A2P78381 396 aa11.51□□□□□ -0.57
SMARCE1-216ENST00000580419 ADARB1P78563 741 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms