RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 GDF1P27539 372 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 GCLMP48507 274 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 SULT1A1P50225 295 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 SULT1A2P50226 295 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 FGF8P55075 233 aaPredicted RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 UBE2NP61088 152 aaKnown RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 HERVK_113P61574 105 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 RANP62826 216 aaKnown RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 HBG1P69891 147 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 HBG2P69892 147 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 FAM3AP98173 230 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 CD300CQ08708 224 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 LAMTOR4Q0VGL1 99 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 PON3Q15166 354 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 PTGES3Q15185 160 aaKnown RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 ALX1Q15699 326 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 MAPK14Q16539 360 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 PRSS8Q16651 343 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 LRRC10Q5BKY1 277 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 HACD4Q5VWC8 232 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 SAXO2Q658L1 398 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 KCTD16Q68DU8 428 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 ZNF493Q6ZR52 646 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 NCCRP1Q6ZVX7 275 aaPredicted RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 FAM231DQ6ZW35 169 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 STRADAQ7RTN6 431 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 HSD17B13Q7Z5P4 300 aaPredicted RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 TMED4Q7Z7H5 227 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 LGI3Q8N145 548 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 COX18Q8N8Q8 333 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 GATD1Q8NB37 220 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 OR10AD1Q8NGE0 317 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 HAVCR2Q8TDQ0 301 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 DTD1Q8TEA8 209 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 RERGQ96A58 199 aaPredicted RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 NTAN1Q96AB6 310 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 TMA16Q96EY4 203 aaKnown RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 RNF185Q96GF1 192 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 FAM19A4Q96LR4 140 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 SDHCQ99643 169 aaPredicted RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 FAAP24Q9BTP7 215 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 EMC6Q9BV81 110 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 PARP12Q9H0J9 701 aaKnown RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 MS4A6AQ9H2W1 248 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 EDA2RQ9HAV5 297 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 C8orf4Q9NR00 106 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 MARCH5Q9NX47 278 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 LSM5Q9Y4Y9 91 aaKnown RBP2.35□□□□□ -2.03
KPNB1-208ENST00000580019 HES2Q9Y543 173 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 FRYLO94915 3013 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 KIF20BQ96Q89 1820 aa2.35□□□□□ -2.03
KPNB1-208ENST00000580019 ZZEF1O43149 2961 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 LRRC37AA6NMS7 1700 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 ABCA12Q86UK0 2595 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 ANKRD17O75179 2603 aaKnown RBP2.34□□□□□ -2.03
KPNB1-208ENST00000580019 IGHV3-35A0A0C4DH35 117 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 A0A0G2JN53 185 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 A0A0J9YXV3 536 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 A0A0U1RQV1 116 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 UPK2O00526 184 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 PEX7O00628 323 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 PSPHP1O15172 72 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 NDUFS5O43920 106 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 ZNF253O75346 499 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 SERF1AO75920 110 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 IGKV1D-16P01601 117 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 IGLV2-11P01706 119 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 MT-ND4P03905 459 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 CHTF8P0CG12 524 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 ZNF17P17021 662 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 ME2P23368 584 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 CXCR1P25024 350 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 RPL12P30050 165 aaKnown RBP2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TSPOP30536 169 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TGFBR2P37173 567 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 CDKN2BP42772 138 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 PPOXP50336 477 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 NCBP2P52298 156 aaKnown RBP eCLIP2.34□□□□□ -2.03
KPNB1-208ENST00000580019 CDKN2DP55273 166 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TCL1AP56279 114 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TAS2R46P59540 309 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 ZNF45Q02386 682 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 PRDX1Q06830 199 aaKnown RBP2.34□□□□□ -2.03
KPNB1-208ENST00000580019 EGFEM1PQ0D2K5 195 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 INCA1Q0VD86 236 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TAF1AQ15573 450 aaPredicted RBP2.34□□□□□ -2.03
KPNB1-208ENST00000580019 SLC9A3R2Q15599 337 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 HIST3H3Q16695 136 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 C4orf26Q17RF5 130 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 CEACAM16Q2WEN9 425 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 CASC10Q5T4H9 136 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 SPNS3Q6ZMD2 512 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 LINC00173Q6ZV60 143 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 NIT1Q86X76 327 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 TMEM61Q8N0U2 210 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 GPR32P1Q8NGA4 272 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 OR4P4Q8NGL7 312 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 OR13G1Q8NGZ3 307 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 OR10G6Q8NH81 332 aa2.34□□□□□ -2.03
KPNB1-208ENST00000580019 ASB13Q8WXK3 278 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms