RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 NPIPB11E5RHQ5 1161 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 GEMIN2O14893 280 aaKnown RBP11.97□□□□□ -0.49
SS18-212ENST00000579061 IL1AP01583 271 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 GABRA5P31644 462 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 GDNFP39905 211 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 GLP1RP43220 463 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 PRRX1P54821 245 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 MED22Q15528 200 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 ACSM3Q53FZ2 586 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 AWAT2Q6E213 333 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 GLIPR1L1Q6UWM5 242 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 IZUMO2Q6UXV1 221 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 OR10A7Q8NGE5 316 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 OR4C13Q8NGP0 309 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 OR13A1Q8NGR1 328 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 PHYHIPQ92561 330 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 MUL1Q969V5 352 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 ZNF286AQ9HBT8 521 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 SPACA1Q9HBV2 294 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 ISYNA1Q9NPH2 558 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 ING3Q9NXR8 418 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 CALYQ9NYX4 217 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 GHRLQ9UBU3 117 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 HILPDAQ9Y5L2 63 aa11.97□□□□□ -0.49
SS18-212ENST00000579061 FAM90A10PA6NDY2 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A18PA6NE21 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A16PA6NEW6 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A20PA6NIJ5 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A7PA6NKC0 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A22PA8MWA6 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A12PA8MX19 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A5PA8MXJ8 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A23PA8MXZ1 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 LEUTXA8MZ59 168 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 H3BUI4 141 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 TIMM23O14925 209 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 RGS10O43665 173 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 SC5DO75845 299 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A15PP0C7V4 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A13PP0C7W8 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A14PP0C7W9 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 FAM90A24PP0C7X0 464 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 GZMHP20718 246 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 CRHBPP24387 322 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 CEACAM3P40198 252 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 ARHGDIBP52566 201 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 PLA1AQ53H76 456 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 BAIAP2L2Q6UXY1 529 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 SLC16A12Q6ZSM3 486 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 PRSS48Q7RTY5 328 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 OR9G1Q8NH87 305 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 SGCDQ92629 289 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 KIRREL1Q96J84 757 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 IDI2-AS1Q9NZ38 188 aa11.96□□□□□ -0.49
SS18-212ENST00000579061 RCC2Q9P258 522 aaKnown RBP11.96□□□□□ -0.49
SS18-212ENST00000579061 WNK1Q9H4A3 2382 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 A0A1W2PP11 408 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 TMEM30CPA0ZSE6 113 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 OOSP1A8MZH6 123 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 F2RL2O00254 374 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 TOR1AO14656 332 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 CHST1O43916 411 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 RAB13P51153 203 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 EFNB2P52799 333 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 GP2P55259 537 aaKnown RBP11.95□□□□□ -0.5
SS18-212ENST00000579061 KRTAP10-3P60369 221 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 SRSF4Q08170 494 aaKnown RBP11.95□□□□□ -0.5
SS18-212ENST00000579061 TPBGQ13641 420 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 ATAD3CQ5T2N8 411 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 OR2T6Q8NHC8 308 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 UFD1Q92890 307 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 TCF7L1Q9HCS4 588 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 ZNF581Q9P0T4 197 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 RAB26Q9ULW5 256 aa11.95□□□□□ -0.5
SS18-212ENST00000579061 BUB1B-PAK6H3BSN5 160 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 GLAP06280 429 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 UCHL1P09936 223 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 UBBP0CG47 229 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 CD37P11049 281 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 NFYBP25208 207 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 BRS3P32247 399 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 MLLT11Q13015 90 aaPredicted RBP11.94□□□□□ -0.5
SS18-212ENST00000579061 RBM39Q14498 530 aaKnown RBP11.94□□□□□ -0.5
SS18-212ENST00000579061 INSL4Q14641 139 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 TRAM1Q15629 374 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 RBM48Q5RL73 367 aaKnown RBP11.94□□□□□ -0.5
SS18-212ENST00000579061 GLT8D1Q68CQ7 371 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 CCBE1Q6UXH8 406 aaPredicted RBP11.94□□□□□ -0.5
SS18-212ENST00000579061 ZNF497Q6ZNH5 498 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 C16orf82Q7Z2V1 217 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 Q8N2B8 174 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 MRGPRDQ8TDS7 321 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 TMED9Q9BVK6 235 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 MMP28Q9H239 520 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 BLOC1S6Q9UL45 172 aa11.94□□□□□ -0.5
SS18-212ENST00000579061 AMMECR1Q9Y4X0 333 aaPredicted RBP11.94□□□□□ -0.5
SS18-212ENST00000579061 FAM172BPA6NC97 362 aa11.93□□□□□ -0.5
SS18-212ENST00000579061 MCRIP1C9JLW8 97 aa11.93□□□□□ -0.5
SS18-212ENST00000579061 LY6LH3BQJ8 138 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms