RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SLC2A5P22732 501 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 F2RP25116 425 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 FGF9P31371 208 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ETV6P41212 452 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 CRYBB2P43320 205 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC6A8P48029 635 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 NAPAP54920 295 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF121P58317 390 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 TPI1P60174 286 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 RHOAP61586 193 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 RPS15AP62244 130 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 HBA1P69905 142 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 BAXQ07812 192 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ST3GAL4Q11206 333 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OR5I1Q13606 314 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 CLINT1Q14677 625 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 QPRTQ15274 297 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SPA17Q15506 151 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 TSNQ15631 228 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 NRF1Q16656 503 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ARHGAP11BQ3KRB8 267 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SPIN4Q56A73 249 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 PDZD11Q5EBL8 140 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 C6orf52Q5T4I8 152 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OGFRL1Q5TC84 451 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 NXNL2Q5VZ03 156 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 PRSS54Q6PEW0 395 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 IGFL1Q6UW32 110 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ENPP6Q6UWR7 440 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 COX15Q7KZN9 410 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 C17orf82Q86X59 251 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 NIT1Q86X76 327 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 CBWD2Q8IUF1 395 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 CBR4Q8N4T8 237 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 YIPF7Q8N8F6 280 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ACOT4Q8N9L9 421 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC30A7Q8NEW0 376 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 NOXO1Q8NFA2 376 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OR4E2Q8NGC2 313 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OR13C8Q8NGS7 320 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OR2A12Q8NGT7 310 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OR56B4Q8NH76 319 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SPPL2BQ8TCT7 592 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 GPR119Q8TDV5 335 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 Q8WTZ3 238 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 GALMQ96C23 342 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 PIK3IP1Q96FE7 263 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SMARCD1Q96GM5 515 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 RBP7Q96R05 134 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 TP53RKQ96S44 253 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 FMO2Q99518 471 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SIGMAR1Q99720 223 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 MARVELD1Q9BSK0 173 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 FAAP24Q9BTP7 215 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 C1QTNF6Q9BXI9 259 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF436Q9C0F3 470 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 NAA50Q9GZZ1 169 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM96AQ9H5X1 160 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM49BQ9NUQ9 324 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 DCAF13Q9NV06 445 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 DMAC2Q9NW81 257 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 DUS2Q9NX74 493 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 CALML5Q9NZT1 146 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 OR1A1Q9P1Q5 309 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 P2RX2Q9UBL9 471 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 PCYOX1Q9UHG3 505 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 NUFIP1Q9UHK0 495 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 LGALS13Q9UHV8 139 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 SAMD4AQ9UPU9 718 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 EXOSC1Q9Y3B2 195 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 RNF11Q9Y3C5 154 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 CHD1O14646 1710 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 MYH11P35749 1972 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 NFASCO94856 1347 aa2.41□□□□□ -2.02
SMCHD1-202ENST00000577300 CCDC88BA6NC98 1476 aa2.4□□□□□ -2.02
SMCHD1-202ENST00000577300 GOLGA3Q08378 1498 aa2.4□□□□□ -2.02
SMCHD1-202ENST00000577300 GRIN2BQ13224 1484 aa2.4□□□□□ -2.02
SMCHD1-202ENST00000577300 A0A087WUJ7 227 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A087WXM4 84 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TRAV39A0A0B4J263 110 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A0B4J2E0 115 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A1B0GX12 115 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CLDN24A6NM45 220 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 FTCDNL1E5RQL4 147 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 F5H6K3 240 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 NPIPB7O75200 414 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 SCRG1O75711 98 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 HAND1O96004 215 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 IFNA1P01562 189 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 IGKV1-17P01599 117 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 APOC3P02656 99 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 PMP2P02689 132 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 TYMSP04818 313 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 FABP3P05413 133 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CD55P08174 381 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CYBAP13498 195 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 HIST1H1CP16403 213 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 CELP19835 753 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 ALOX5APP20292 161 aa2.4□□□□□ -2.03
SMCHD1-202ENST00000577300 HMGB2P26583 209 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms