RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SCAF4O95104 1147 aaKnown RBP13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A15PP0C7V4 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A13PP0C7W8 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A14PP0C7W9 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A24PP0C7X0 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 UCP1P25874 307 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FOXO1Q12778 655 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 ZNF154Q13106 437 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 ICAM4Q14773 271 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 HERPUD1Q15011 391 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 WIPI1Q5MNZ9 446 aaPredicted RBP13.42□□□□□ -0.26
NUP88-207ENST00000573584 CLEC18CQ8NCF0 446 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 OR56B2PQ8NGI1 322 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 OR2V1Q8NHB1 315 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 NEK7Q8TDX7 302 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 ABHD3Q8WU67 409 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 TOLLIPQ9H0E2 274 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 UBE2ZQ9H832 354 aaPredicted RBP13.42□□□□□ -0.26
NUP88-207ENST00000573584 WSB1Q9Y6I7 421 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 TNFSF12O43508 249 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 RPS18P62269 152 aaKnown RBP13.42□□□□□ -0.26
NUP88-207ENST00000573584 ABLIM2Q6H8Q1 611 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 LURAP1LQ8IV03 231 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 CMTM1Q8IZ96 169 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 PLPPR1Q8TBJ4 325 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 PRDM14Q9GZV8 571 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 URGCP-MRPS24S4R325 110 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 DUXBA0A1W2PPF3 345 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 IGHV2-70P01814 119 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 HSPB1P04792 205 aaKnown RBP13.41□□□□□ -0.26
NUP88-207ENST00000573584 GPM6AP51674 278 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 RAB2AP61019 212 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 TLE4Q04727 773 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 SRSF7Q16629 238 aaKnown RBP eCLIP13.41□□□□□ -0.26
NUP88-207ENST00000573584 SP5Q6BEB4 398 aaPredicted RBP13.41□□□□□ -0.26
NUP88-207ENST00000573584 ZNF343Q6P1L6 599 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 EDARADDQ8WWZ3 215 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 ADGRG7Q96K78 797 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 GGACTQ9BVM4 153 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 KIAA1549Q9HCM3 1950 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 ZNHIT1O43257 154 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 SLC34A2O95436 690 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 MMP9P14780 707 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 HOXA5P20719 270 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 FGF12P61328 243 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 PRDX4Q13162 271 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 ELOBQ15370 118 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 ZNF506Q5JVG8 444 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 SLC23A3Q6PIS1 610 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 P4HA3Q7Z4N8 544 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 NIPSNAP3BQ9BS92 247 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 IL36RNQ9UBH0 155 aa13.41□□□□□ -0.26
NUP88-207ENST00000573584 A0A087WWC5 75 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 TUSC2O75896 110 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 RPL23AP62750 156 aaKnown RBP13.4□□□□□ -0.26
NUP88-207ENST00000573584 ZNF674Q2M3X9 581 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 CLDND2Q8NHS1 167 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 Q8WTZ3 238 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 RBMXL1Q96E39 390 aaKnown RBP13.4□□□□□ -0.26
NUP88-207ENST00000573584 ZNF845Q96IR2 970 aaPredicted RBP13.4□□□□□ -0.26
NUP88-207ENST00000573584 PI4KAP42356 2102 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 KIR2DS1A0A191URI9 304 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 CEACAM1P13688 526 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 FOLR3P41439 243 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 KIR2DS4P43632 304 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 NDUFA6P56556 154 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 KIR2DS1Q14954 304 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 COLCA1Q6ZS62 124 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 TVP23CQ96ET8 276 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 ATP5SQ99766 215 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 RNF115Q9Y4L5 304 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 FREM2Q5SZK8 3169 aa13.4□□□□□ -0.26
NUP88-207ENST00000573584 IGKV1-6A0A0C4DH72 117 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 CXCL1P09341 107 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 PAX9P55771 341 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 IL24Q13007 206 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 OR5D13Q8NGL4 314 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 REPIN1Q9BWE0 567 aaKnown RBP13.4□□□□□ -0.27
NUP88-207ENST00000573584 FGF23Q9GZV9 251 aaPredicted RBP13.4□□□□□ -0.27
NUP88-207ENST00000573584 MTCH1Q9NZJ7 389 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 CRIM1Q9NZV1 1036 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 TAAR3PQ9P1P4 343 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 ATP23Q9Y6H3 246 aa13.4□□□□□ -0.27
NUP88-207ENST00000573584 PGLYRP1O75594 196 aaPredicted RBP13.39□□□□□ -0.27
NUP88-207ENST00000573584 CTXN2P0C2S0 81 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 CCL2P13500 99 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 CDX1P47902 265 aaPredicted RBP13.39□□□□□ -0.27
NUP88-207ENST00000573584 TAS2R30P59541 319 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 DOK5Q9P104 306 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 LRRC3CA6NJW4 275 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 H0Y980 276 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 ATXN7O15265 892 aaPredicted RBP13.39□□□□□ -0.27
NUP88-207ENST00000573584 HBE1P02100 147 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 ERVFRD-1P60508 538 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 C9orf135Q5VTT2 229 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 STX12Q86Y82 276 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 THNSL2Q86YJ6 484 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 CLDN23Q96B33 292 aa13.39□□□□□ -0.27
NUP88-207ENST00000573584 A0A096LPE4 126 aa13.38□□□□□ -0.27
NUP88-207ENST00000573584 A0A1W2PPZ6 126 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms