RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 OR8U1Q8NH10 309 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 OR2AE1Q8NHA4 323 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 AKR7LQ8NHP1 331 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 SECTM1Q8WVN6 248 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 MAFIPQ8WZ33 124 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 RELTQ969Z4 430 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 FER1L6-AS2Q96M78 137 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 CIB3Q96Q77 187 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-250ENST00000568290 CLCC1Q96S66 551 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 SOX7Q9BT81 388 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 SRXN1Q9BYN0 137 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 TMEM231Q9H6L2 316 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 LRFN1Q9P244 771 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 FAM96BQ9Y3D0 163 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 FBXO7Q9Y3I1 522 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 OR2W1Q9Y3N9 320 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 RBM7Q9Y580 266 aaKnown RBP6.58□□□□□ -1.36
ATXN3-250ENST00000568290 U3KQA8 63 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 SPAG17Q6Q759 2223 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 SEC16AO15027 2179 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 SPTBP11277 2137 aa6.58□□□□□ -1.36
ATXN3-250ENST00000568290 TRANK1O15050 2925 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 RP1P56715 2156 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 TMEM210A6NLX4 147 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 K7N7A8 449 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 SH2D1BO14796 132 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 AGPAT2O15120 278 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 NME2P1O60361 137 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 MMP7P09237 267 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-250ENST00000568290 JMJD7P0C870 316 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 F2RP25116 425 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 NFYBP25208 207 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 EIF2S3P41091 472 aaKnown RBP6.57□□□□□ -1.36
ATXN3-250ENST00000568290 HAAOP46952 286 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 RRADP55042 308 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 GFRA1P56159 465 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 HLA-DRB3P79483 266 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 IGFBP7Q16270 282 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 GABRA6Q16445 453 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 TBC1D28Q2M2D7 210 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 PIGYQ3MUY2 71 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 ZNF506Q5JVG8 444 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 SELENOHQ8IZQ5 122 aaKnown RBP6.57□□□□□ -1.36
ATXN3-250ENST00000568290 FAM58AQ8N1B3 248 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 ROBO4Q8WZ75 1007 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 NINJ1Q92982 152 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 HIST1H2BAQ96A08 127 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 ALKBH3Q96Q83 286 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-250ENST00000568290 CABLES2Q9BTV7 478 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 PROK2Q9HC23 129 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 SLC7A10Q9NS82 523 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 COA4Q9NYJ1 87 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 TIMM9Q9Y5J7 89 aa6.57□□□□□ -1.36
ATXN3-250ENST00000568290 MEX3AA1L020 520 aaKnown RBP6.56□□□□□ -1.36
ATXN3-250ENST00000568290 C5orf52A6NGY3 159 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 C17orf112F2Z3M2 114 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 J3QT63 122 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 EREGO14944 169 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 ADAM20O43506 726 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 SSSCA1O60232 199 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 ACAA1P09110 424 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-250ENST00000568290 MYF5P13349 255 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 RAC2P15153 192 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 ATP6V0CP27449 155 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 HOXC12P31275 282 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 B2MP61769 119 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 RPS18P62269 152 aaKnown RBP6.56□□□□□ -1.36
ATXN3-250ENST00000568290 ARF1P84077 181 aaKnown RBP6.56□□□□□ -1.36
ATXN3-250ENST00000568290 RPL19P84098 196 aaKnown RBP6.56□□□□□ -1.36
ATXN3-250ENST00000568290 SP6Q3SY56 376 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 WIPI1Q5MNZ9 446 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-250ENST00000568290 CRIP3Q6Q6R5 217 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 C8orf86Q6ZUL3 223 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 MRGPRGQ86SM5 289 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 LILRB2Q8N423 598 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 OR56B2PQ8NGI1 322 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 OR10V1Q8NGI7 309 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 OR5C1Q8NGR4 320 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 ERGIC1Q969X5 290 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 SSX3Q99909 188 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 TXNDC17Q9BRA2 123 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 HDHD3Q9BSH5 251 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-250ENST00000568290 KCNIP2Q9NS61 270 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 P4HTMQ9NXG6 502 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 LOXL2Q9Y4K0 774 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 ADAMTS20P59510 1910 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 UNC13CQ8NB66 2214 aa6.56□□□□□ -1.36
ATXN3-250ENST00000568290 CHD9Q3L8U1 2897 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 IGKV1-27A0A075B6S5 117 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 IGKV1D-8A0A087WSZ0 117 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 IGKV1-12A0A0C4DH73 117 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 C5orf49A4QMS7 147 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 NKX2-6A6NCS4 301 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 SLC22A20A6NK97 555 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 PCP4L1A6NKN8 68 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 ZNF891A8MT65 544 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-250ENST00000568290 SEC14L6B5MCN3 397 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 FAM157AC9JC47 383 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 E9PLN8 166 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 CLDN34H7C241 214 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms