RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 ZNF286AQ9HBT8 521 aa8.16□□□□□ -1.1
GTF3C1-206ENST00000566779 TMEM138Q9NPI0 162 aa8.16□□□□□ -1.1
GTF3C1-206ENST00000566779 C8orf4Q9NR00 106 aa8.16□□□□□ -1.1
GTF3C1-206ENST00000566779 ZNF581Q9P0T4 197 aa8.16□□□□□ -1.1
GTF3C1-206ENST00000566779 TRAV24A0A0B4J272 114 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 A0A1W2PP11 408 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 TSPAN9O75954 239 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 CSF1P09603 554 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 ERP29P30040 261 aaKnown RBP8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 C2orf68Q2NKX9 166 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 NSUN5P1Q3KNT7 163 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 Q499Y3 187 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 C9orf152Q5JTZ5 239 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 UTF1Q5T230 341 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 OR52W1Q6IF63 320 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 CCBE1Q6UXH8 406 aaPredicted RBP8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 C1QL4Q86Z23 238 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 OSR2Q8N2R0 312 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 PXT1Q8NFP0 134 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 OR4P4Q8NGL7 312 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 OR13A1Q8NGR1 328 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 OR52N1Q8NH53 320 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 RFESDQ8TAC1 157 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 PLPPR1Q8TBJ4 325 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 ZNF596Q8TC21 504 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 PIFOQ8TCI5 191 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 CCDC107Q8WV48 283 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 MALSU1Q96EH3 234 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 DPCDQ9BVM2 203 aaPredicted RBP8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 CALYQ9NYX4 217 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 PITPNC1Q9UKF7 332 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 ST3GAL6Q9Y274 331 aa8.15□□□□□ -1.1
GTF3C1-206ENST00000566779 PLXNB1O43157 2135 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 PKD1L1Q8TDX9 2849 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 TRAV8-7A0A075B6U6 113 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 A0A1W2PPE3 182 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 A0A1W2PRX2 142 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 A6NDX4 124 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 FAM90A8PA6NJQ4 464 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 SH2D7A6NKC9 451 aaPredicted RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 ZNF729A6NN14 1252 aaPredicted RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 PTGES3LE9PB15 166 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 GEMIN2O14893 280 aaKnown RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 OGG1O15527 345 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 CELP19835 753 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 C21orf33P30042 268 aaPredicted RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 SSTR5P35346 364 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 ARHGDIBP52566 201 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 EFNB2P52799 333 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 WNT4P56705 351 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 RBM11P57052 281 aaKnown RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 TAS2R43P59537 309 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 DEFA6Q01524 100 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 IL13RA2Q14627 380 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 HERPUD1Q15011 391 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 AANATQ16613 207 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 MINOS1Q5TGZ0 78 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 DMKNQ6E0U4 476 aaPredicted RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 AWAT2Q6E213 333 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 HEPN1Q6WQI6 88 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 SUMF2Q8NBJ7 301 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 TOMM40LQ969M1 308 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 BARHL1Q9BZE3 327 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 MMP27Q9H306 513 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 RANBP3Q9H6Z4 567 aaPredicted RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 ZNF702PQ9H963 129 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 RHOFQ9HBH0 211 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 TAS2R3Q9NYW6 316 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 OR6C3Q9NZP0 311 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 FBLN5Q9UBX5 448 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 NKX1-2Q9UD57 310 aaPredicted RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 MRPS28Q9Y2Q9 187 aaKnown RBP8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 MINOS1-NBL1R4GNA1 71 aa8.14□□□□□ -1.11
GTF3C1-206ENST00000566779 TRBV5-5A0A0J9YX44 114 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 VGLL3A8MV65 326 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 LEUTXA8MZ59 168 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 KCNAB3O43448 404 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 CSN2P05814 226 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 LMO1P25800 156 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 BRS3P32247 399 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 CEACAM3P40198 252 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 VDAC2P45880 294 aaPredicted RBP8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 PRRX1P54821 245 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 AQP4P55087 323 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 GABPB1Q06547 395 aaPredicted RBP8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 HLA-DRB5Q30154 266 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 YIF1BQ5BJH7 314 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 KHDC1LQ5JSQ8 128 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 RSBN1Q5VWQ0 802 aaPredicted RBP8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 ELP2Q6IA86 826 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 LAIR2Q6ISS4 152 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 ZNF529Q6P280 563 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 GLIPR1L1Q6UWM5 242 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 PRR18Q8N4B5 295 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 OR51T1Q8NGJ9 327 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 FAM46BQ96A09 425 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 RPEQ96AT9 228 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 KIRREL1Q96J84 757 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 PGLYRP3Q96LB9 341 aa8.13□□□□□ -1.11
GTF3C1-206ENST00000566779 TMED9Q9BVK6 235 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms