RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 SMIM18P0DKX4 95 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 PSMB9P28065 219 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 CEACAM3P40198 252 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 NPBWR2P48146 333 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 MTCP1P56278 107 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 TRAM1Q15629 374 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 ABCA11PQ4W5N1 156 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 LIPKQ5VXJ0 399 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 LHFPL2Q6ZUX7 228 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 RDH10Q8IZV5 341 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 MS4A15Q8N5U1 240 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 GPR148Q8TDV2 347 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 DPF1Q92782 380 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 MUL1Q969V5 352 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 CREB3L1Q96BA8 519 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 GPR61Q9BZJ8 451 aa13.2□□□□□ -0.3
TSR3-202ENST00000566296 K7EIL1 84 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 M0QZK8 103 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 ZNF20P17024 532 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 CDK2P24941 298 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 CD24P25063 80 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 PSMA1P25786 263 aaKnown RBP13.19□□□□□ -0.3
TSR3-202ENST00000566296 C9orf152Q5JTZ5 239 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 HEPN1Q6WQI6 88 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 TSEN15Q8WW01 171 aaKnown RBP13.19□□□□□ -0.3
TSR3-202ENST00000566296 THRSPQ92748 146 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 SPSB1Q96BD6 273 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 RBM14Q96PK6 669 aaKnown RBP13.19□□□□□ -0.3
TSR3-202ENST00000566296 TAS2R3Q9NYW6 316 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 DHDHQ9UQ10 334 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 GSTK1Q9Y2Q3 226 aa13.19□□□□□ -0.3
TSR3-202ENST00000566296 FAM172BPA6NC97 362 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 CCRL2O00421 344 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 TOR1AO14656 332 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 SH2D1BO14796 132 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 OR2H2O95918 312 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 CD2P06729 351 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 CALCBP10092 127 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 ZNF44P15621 663 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 ATF1P18846 271 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 MNDAP41218 407 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 PTGFRP43088 359 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 TCTEX1D4Q5JR98 221 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 BAIAP2L2Q6UXY1 529 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 UTS2BQ765I0 119 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 OR13C3Q8NGS6 347 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 OR10AC1Q8NH08 325 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 RGP1Q92546 391 aaPredicted RBP13.18□□□□□ -0.3
TSR3-202ENST00000566296 ADAT3Q96EY9 351 aaPredicted RBP13.18□□□□□ -0.3
TSR3-202ENST00000566296 HMG20AQ9NP66 347 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 NDUFB11Q9NX14 153 aa13.18□□□□□ -0.3
TSR3-202ENST00000566296 TRBV5-5A0A0J9YX44 114 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 CD34P28906 385 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 GP2P55259 537 aaKnown RBP13.17□□□□□ -0.3
TSR3-202ENST00000566296 HLA-DRB5Q30154 266 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 Q499Y3 187 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 DEFB121Q5J5C9 76 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 TPTE2P1Q5T6R2 138 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 OR4D6Q8NGJ1 314 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 OR51A4Q8NGJ6 313 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 RFT1Q96AA3 541 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 TMED9Q9BVK6 235 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 ZNF286AQ9HBT8 521 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 NEK6Q9HC98 313 aa13.17□□□□□ -0.3
TSR3-202ENST00000566296 KMT2CQ8NEZ4 4911 aaKnown RBP13.17□□□□□ -0.3
TSR3-202ENST00000566296 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 ODAMA1E959 279 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
TSR3-202ENST00000566296 OOSP1A8MZH6 123 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 IGLV1-47P01700 117 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 MAPK3P27361 379 aaPredicted RBP13.16□□□□□ -0.3
TSR3-202ENST00000566296 PRRX1P54821 245 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 RPS11P62280 158 aaKnown RBP eCLIP13.16□□□□□ -0.3
TSR3-202ENST00000566296 AESQ08117 197 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 PDZK1IP1Q13113 114 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
TSR3-202ENST00000566296 SSX1Q16384 188 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 OSR2Q8N2R0 312 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 CORO2AQ92828 525 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 FGGYQ96C11 551 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 PCDHB16Q9NRJ7 776 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 SCOCQ9UIL1 159 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 MOB4Q9Y3A3 225 aa13.16□□□□□ -0.3
TSR3-202ENST00000566296 PSMB11A5LHX3 300 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 BUB1B-PAK6H3BSN5 160 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 KDM4BO94953 1096 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 CSN2P05814 226 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 GDNFP39905 211 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 OR3A4PP47883 348 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 GLIPR1P48060 266 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 SOX2P48431 317 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 RPS25P62851 125 aaKnown RBP13.15□□□□□ -0.3
TSR3-202ENST00000566296 SCN1BQ07699 218 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 KRBOX4Q5JUW0 171 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 C11orf87Q6NUJ2 197 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 SERPINA12Q8IW75 414 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 PARP16Q8N5Y8 322 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms