RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PLPPR1Q8TBJ4 325 aa6.78□□□□□ -1.32
CAPN3-213ENST00000565173 NOL4LQ96MY1 436 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-213ENST00000565173 NR1H4Q96RI1 486 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-213ENST00000565173 ALG8Q9BVK2 526 aa6.78□□□□□ -1.32
CAPN3-213ENST00000565173 DCLRE1BQ9H816 532 aa6.78□□□□□ -1.32
CAPN3-213ENST00000565173 PCDHB16Q9NRJ7 776 aa6.78□□□□□ -1.32
CAPN3-213ENST00000565173 ERVK13-1Q9NX77 482 aa6.78□□□□□ -1.32
CAPN3-213ENST00000565173 IDI2-AS1Q9NZ38 188 aa6.78□□□□□ -1.32
CAPN3-213ENST00000565173 TRAV39A0A0B4J263 110 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 TMEM212A6NML5 194 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 GABRPO00591 440 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 IGHG2P01859 326 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 GLP1RP43220 463 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 RAB7AP51149 207 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 RPL23AP62750 156 aaKnown RBP6.77□□□□□ -1.33
CAPN3-213ENST00000565173 MADCAM1Q13477 382 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 EBI3Q14213 229 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 HNF4GQ14541 408 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 IL13RA2Q14627 380 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 PIGYQ3MUY2 71 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 PAN3Q58A45 887 aaKnown RBP6.77□□□□□ -1.33
CAPN3-213ENST00000565173 DEFB121Q5J5C9 76 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 KHDC1LQ5JSQ8 128 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 SLC16A12Q6ZSM3 486 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 OR2W3Q7Z3T1 314 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 OR10K1Q8NGX5 313 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 OR5AK2Q8NH90 309 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 HAVCR2Q8TDQ0 301 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 MRGPRDQ8TDS7 321 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 RGP1Q92546 391 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-213ENST00000565173 TOMM40LQ969M1 308 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 RPEQ96AT9 228 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 P2RX4Q99571 388 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 BARHL1Q9BZE3 327 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 AMBNQ9NP70 447 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 MRPS18AQ9NVS2 196 aaKnown RBP6.77□□□□□ -1.33
CAPN3-213ENST00000565173 NKX1-2Q9UD57 310 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-213ENST00000565173 LINC00527Q9UJ94 153 aa6.77□□□□□ -1.33
CAPN3-213ENST00000565173 AMMECR1Q9Y4X0 333 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-213ENST00000565173 A0A1W2PPE3 182 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 SNTNA6NMZ2 147 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 C15orf65H3BRN8 121 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 FGF16O43320 207 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 RRP9O43818 475 aaKnown RBP6.76□□□□□ -1.33
CAPN3-213ENST00000565173 CLIC3O95833 236 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 RPSAP08865 295 aaKnown RBP6.76□□□□□ -1.33
CAPN3-213ENST00000565173 TMEM11P17152 192 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 SSTR5P35346 364 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 KCNJ3P48549 501 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 GNG10P50151 68 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 GTF2A1P52655 376 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF816Q0VGE8 651 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-213ENST00000565173 HES1Q14469 280 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 LTC4SQ16873 150 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 OR8H3Q8N146 312 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 Q8N6K4 173 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 OR10A7Q8NGE5 316 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 OR52I1Q8NGK6 324 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 CHPT1Q8WUD6 406 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 TNFAIP8L1Q8WVP5 186 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 IFT22Q9H7X7 185 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 C8orf4Q9NR00 106 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 PLSCR3Q9NRY6 295 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 ZFP57Q9NU63 452 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 SMPD3Q9NY59 655 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-213ENST00000565173 DHDHQ9UQ10 334 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 GMPPBQ9Y5P6 360 aa6.76□□□□□ -1.33
CAPN3-213ENST00000565173 DNAH7Q8WXX0 4024 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 IGHV1-3A0A0C4DH29 117 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 SERPINE3A8MV23 424 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 CASQ2O14958 399 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 CDRT1O95170 752 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 FADS2O95864 444 aaKnown RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 IGKV1D-33P01593 117 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 IGKV1-33P01594 117 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 CCDC159P0C7I6 412 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 LIMS3P0CW19 117 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 LIMS4P0CW20 117 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 VSIG8P0DPA2 414 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 RAB3AP20336 220 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 GZMHP20718 246 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 SLC6A1P30531 599 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 MYCNOSP40205 109 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 SOX2P48431 317 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 GBX2P52951 348 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 RAB40BQ12829 278 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 MRPL28Q13084 256 aaKnown RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 NHLRC3Q5JS37 347 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 OGFRL1Q5TC84 451 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 XAF1Q6GPH4 301 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 FAM53AQ6NSI3 398 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 SATL1Q86VE3 508 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 STPG2Q8N412 459 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 COMMD1Q8N668 190 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 PACRGLQ8N7B6 248 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 SUMF2Q8NBJ7 301 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 TMEM104Q8NE00 496 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF555Q8NEP9 628 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 OR51D1Q8NGF3 324 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms