RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 MGLLQ99685 303 aa10.87□□□□□ -0.67
CLK3-216ENST00000564468 CST11Q9H112 138 aa10.87□□□□□ -0.67
CLK3-216ENST00000564468 ABCB10Q9NRK6 738 aa10.87□□□□□ -0.67
CLK3-216ENST00000564468 KBTBD11-OT1A0A1B0GTJ5 212 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 CLPSL1A2RUU4 121 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 VGLL3A8MV65 326 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 TOR1AO14656 332 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 KCNAB3O43448 404 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 SC5DO75845 299 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 ARL6IP5O75915 188 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 UCHL1P09936 223 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 GZMHP20718 246 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 MDKP21741 143 aaPredicted RBP10.86□□□□□ -0.67
CLK3-216ENST00000564468 OMGP23515 440 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 HTR1DP28221 377 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 CD34P28906 385 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 GLP1RP43220 463 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 ARHGDIBP52566 201 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 PRRX1P54821 245 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 GABARAPL2P60520 117 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
CLK3-216ENST00000564468 SLC35E4Q6ICL7 350 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 ZNF367Q7RTV3 350 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 LHFPL4Q7Z7J7 247 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 LYPD6Q86Y78 171 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 ABHD12Q8N2K0 398 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 SVOPQ8N4V2 548 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 OR10A7Q8NGE5 316 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 NEK7Q8TDX7 302 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 C17orf50Q8WW18 174 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 AJUBAQ96IF1 538 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 YTHDF1Q9BYJ9 559 aaKnown RBP10.86□□□□□ -0.67
CLK3-216ENST00000564468 PPIL3Q9H2H8 161 aaKnown RBP10.86□□□□□ -0.67
CLK3-216ENST00000564468 KIF25Q9UIL4 384 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 PITPNC1Q9UKF7 332 aa10.86□□□□□ -0.67
CLK3-216ENST00000564468 PKD1L1Q8TDX9 2849 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 TMEM30CPA0ZSE6 113 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 MCRIP1C9JLW8 97 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 DENRO43583 198 aaKnown RBP10.85□□□□□ -0.67
CLK3-216ENST00000564468 CRTAPO75718 401 aaPredicted RBP10.85□□□□□ -0.67
CLK3-216ENST00000564468 GLAP06280 429 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 MGMTP16455 207 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 CEACAM3P40198 252 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 FAM189A2Q15884 450 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 SSX2Q16385 188 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 PRAMEF5Q5TYX0 476 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 OLFML2AQ68BL7 652 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 TMEM203Q969S6 136 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 RAB9BQ9NP90 201 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 ACOT13Q9NPJ3 140 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 DPM3Q9P2X0 92 aa10.85□□□□□ -0.67
CLK3-216ENST00000564468 A0A087X0M5 115 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 A0A1B0GX30 115 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 A0A1W2PP11 408 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 CA11O75493 328 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 MMP23AO75900 390 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 IL1AP01583 271 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 CGB3P0DN86 165 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 CGB7P0DN87 165 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 GABRA5P31644 462 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 MAP2K4P45985 399 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 PSMD7P51665 324 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 DYNLT3P51808 116 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 RELBQ01201 579 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 INSL4Q14641 139 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 C17orf58Q2M2W7 97 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 C1orf100Q5SVJ3 147 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 FAM27D1Q5T7N8 215 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 SLC16A12Q6ZSM3 486 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 LRRTM1Q86UE6 522 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 OR13A1Q8NGR1 328 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 SELENOIQ9C0D9 397 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 BANF2Q9H503 90 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 C16orf95Q9H693 158 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 LINC00574Q9H8X3 128 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 IDI2-AS1Q9NZ38 188 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 RRP15Q9Y3B9 282 aaKnown RBP10.84□□□□□ -0.67
CLK3-216ENST00000564468 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
CLK3-216ENST00000564468 LEUTXA8MZ59 168 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 TSPAN9O75954 239 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 FUT3P21217 361 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 NFYBP25208 207 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 HTR2CP28335 458 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 GP2P55259 537 aaKnown RBP10.83□□□□□ -0.68
CLK3-216ENST00000564468 RPS25P62851 125 aaKnown RBP10.83□□□□□ -0.68
CLK3-216ENST00000564468 LY6EQ16553 131 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 RAB12Q6IQ22 244 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 Q6ZSV7 163 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 OR6M1Q8NGM8 313 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 OR9G1Q8NH87 305 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 KCNG3Q8TAE7 436 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 MRGPRDQ8TDS7 321 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 KIRREL1Q96J84 757 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 Q96M66 194 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 RANBP3Q9H6Z4 567 aaPredicted RBP10.83□□□□□ -0.68
CLK3-216ENST00000564468 ETAA1Q9NY74 926 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 RCC2Q9P258 522 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms