RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 TOR1AO14656 332 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 CELP19835 753 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 LTC4SQ16873 150 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 SLC22A6Q4U2R8 563 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 FBLN7Q53RD9 439 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 Q6ZS46 218 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 JAGN1Q8N5M9 183 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 NANOGP1Q8N7R0 232 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 FAM110DQ8TAY7 271 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 NRG4Q8WWG1 115 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 LEAP2Q969E1 77 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 MUL1Q969V5 352 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 DERL3Q96Q80 235 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 NCOR1P1Q9H4R4 102 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 IFT22Q9H7X7 185 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 SERTAD4Q9NUC0 356 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 LEUTXA8MZ59 168 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 BUB1B-PAK6H3BSN5 160 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 PIN1P1O15428 100 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 IL1AP01583 271 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 IGHV3-7P01780 117 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 SSTR5P35346 364 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 KCNJ3P48549 501 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 AQP4P55087 323 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 PAX5Q02548 391 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 TPTE2P1Q5T6R2 138 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 ZNF565Q8N9K5 539 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 RFESDQ8TAC1 157 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 CFHR4Q92496 578 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 PAK1IP1Q9NWT1 392 aaPredicted RBP16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 IDI2-AS1Q9NZ38 188 aa16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 MRPS28Q9Y2Q9 187 aaKnown RBP16.02■□□□□ 0.16
SHCBP1-203ENST00000564272 MAS1P04201 325 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 CSF1P09603 554 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 PRRX1P54821 245 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 BLCAPP62952 87 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 TMEM95Q3KNT9 176 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 ATAD3CQ5T2N8 411 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 LINC00596Q86U02 117 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 OR5M11Q96RB7 305 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 PRSS22Q9GZN4 317 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 MMP28Q9H239 520 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 ERGIC3Q9Y282 383 aa16.01■□□□□ 0.15
SHCBP1-203ENST00000564272 LY6LH3BQJ8 138 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 ZNF780AO75290 641 aaPredicted RBP16■□□□□ 0.15
SHCBP1-203ENST00000564272 CD1AP06126 327 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 CDK1P06493 297 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 GTF2F2P13984 249 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 BRS3P32247 399 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 DEFA6Q01524 100 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 MPV17LQ2QL34 196 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 ARSJQ5FYB0 599 aaPredicted RBP16■□□□□ 0.15
SHCBP1-203ENST00000564272 GLIPR1L1Q6UWM5 242 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 DTX3Q8N9I9 347 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 OR9G1Q8NH87 305 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 SGCDQ92629 289 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 LINC00574Q9H8X3 128 aa16■□□□□ 0.15
SHCBP1-203ENST00000564272 TMEM30CPA0ZSE6 113 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 NPIPB11E5RHQ5 1161 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 PTGES3LE9PB15 166 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 CEACAM3P40198 252 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 GNG10P50151 68 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 ARHGDIBP52566 201 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 INSL4Q14641 139 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 C6orf141Q5SZD1 244 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 AWAT2Q6E213 333 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 LYG1Q8N1E2 194 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 NEK7Q8TDX7 302 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 CREB3L1Q96BA8 519 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 MND1Q9BWT6 205 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 PCDHB16Q9NRJ7 776 aa15.99■□□□□ 0.15
SHCBP1-203ENST00000564272 J3QR06 171 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 FBXO24O75426 580 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 CD28P10747 220 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 GPR176Q14439 515 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 LYPD6Q86Y78 171 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 UBALD1Q8TB05 177 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 RPEQ96AT9 228 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 SLC25A33Q9BSK2 321 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 BANF2Q9H503 90 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 PSG11Q9UQ72 335 aa15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 LSM2Q9Y333 95 aaKnown RBP15.98■□□□□ 0.15
SHCBP1-203ENST00000564272 NOTCH1P46531 2555 aa15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 MAPK3P27361 379 aaPredicted RBP15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 VDAC2P45880 294 aaPredicted RBP15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 GABPB1Q06547 395 aaPredicted RBP15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 RNLSQ5VYX0 342 aa15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 CCDC144NLQ6NUI1 221 aa15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 WIPF2Q8TF74 440 aaPredicted RBP15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 CCDC107Q8WV48 283 aa15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 MYDGFQ969H8 173 aa15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 TOMM40LQ969M1 308 aa15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 WNT10AQ9GZT5 417 aa15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 LIN7BQ9HAP6 207 aa15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 RCC2Q9P258 522 aaKnown RBP15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 AMMECR1Q9Y4X0 333 aaPredicted RBP15.97■□□□□ 0.15
SHCBP1-203ENST00000564272 A0A1W2PPE3 182 aa15.96■□□□□ 0.15
SHCBP1-203ENST00000564272 OOSP1A8MZH6 123 aa15.96■□□□□ 0.15
SHCBP1-203ENST00000564272 PEX14O75381 377 aa15.96■□□□□ 0.15
SHCBP1-203ENST00000564272 MNDAP41218 407 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms