RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 KIAA2026Q5HYC2 2103 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 CBY3A6NI87 242 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 HS3ST1O14792 307 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 IGHV2-5P01817 119 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 HNF1AP20823 631 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 S100GP29377 79 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 SUCLG1P53597 346 aaKnown RBP10.21□□□□□ -0.77
ABCA3-203ENST00000563623 HIST2H3PS2Q5TEC6 136 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 NABP1Q96AH0 204 aa10.21□□□□□ -0.77
ABCA3-203ENST00000563623 RP1L1Q8IWN7 2480 aaPredicted RBP10.21□□□□□ -0.77
ABCA3-203ENST00000563623 ZNF587BE7ETH6 402 aa10.21□□□□□ -0.78
ABCA3-203ENST00000563623 CA11O75493 328 aa10.21□□□□□ -0.78
ABCA3-203ENST00000563623 SSR4P51571 173 aa10.21□□□□□ -0.78
ABCA3-203ENST00000563623 ELLP55199 621 aaPredicted RBP10.21□□□□□ -0.78
ABCA3-203ENST00000563623 HEPN1Q6WQI6 88 aa10.21□□□□□ -0.78
ABCA3-203ENST00000563623 DBX2Q6ZNG2 339 aa10.21□□□□□ -0.78
ABCA3-203ENST00000563623 CALHM1Q8IU99 346 aa10.21□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF845Q96IR2 970 aaPredicted RBP10.21□□□□□ -0.78
ABCA3-203ENST00000563623 SGCZQ96LD1 299 aa10.21□□□□□ -0.78
ABCA3-203ENST00000563623 MRPL37Q9BZE1 423 aaKnown RBP10.21□□□□□ -0.78
ABCA3-203ENST00000563623 KCNS2Q9ULS6 477 aa10.21□□□□□ -0.78
ABCA3-203ENST00000563623 TRAV39A0A0B4J263 110 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 IGHV3-64DA0A0J9YX35 117 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 CEBPZOSA8MTT3 80 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 C3orf80F5H4A9 247 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 SCAF4O95104 1147 aaKnown RBP10.2□□□□□ -0.78
ABCA3-203ENST00000563623 FUT6P51993 359 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 SRPXP78539 464 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 HIST3H3Q16695 136 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF468Q5VIY5 522 aaPredicted RBP10.2□□□□□ -0.78
ABCA3-203ENST00000563623 WDR74Q6RFH5 385 aaPredicted RBP10.2□□□□□ -0.78
ABCA3-203ENST00000563623 LYPD6BQ8NI32 183 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 TMEM171Q8WVE6 324 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 SRXN1Q9BYN0 137 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 GLRX2Q9NS18 164 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 HSF4Q9ULV5 492 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 CHCHD2Q9Y6H1 151 aaPredicted RBP10.2□□□□□ -0.78
ABCA3-203ENST00000563623 A0A087WZY1 265 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 HMGB3O15347 200 aaKnown RBP10.2□□□□□ -0.78
ABCA3-203ENST00000563623 SRP19P09132 144 aaKnown RBP10.2□□□□□ -0.78
ABCA3-203ENST00000563623 GPM6AP51674 278 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 FAM27BQ5VT28 67 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 RPS19BP1Q86WX3 136 aaKnown RBP10.2□□□□□ -0.78
ABCA3-203ENST00000563623 GNPNAT1Q96EK6 184 aaPredicted RBP10.2□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2AAQ96QV6 131 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 ANGPTL4Q9BY76 406 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 TMEM222Q9H0R3 208 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 MARCH11A6NNE9 402 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 CTSSP25774 331 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 PSG4Q00888 419 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF100Q8IYN0 542 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 MUCL1Q96DR8 90 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 FOXB1Q99853 325 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 RSG1Q9BU20 258 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 ARV1Q9H2C2 271 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 KIAA1456Q9P272 454 aa10.2□□□□□ -0.78
ABCA3-203ENST00000563623 C9J4A7 227 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 CDS2O95674 445 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 HOXA5P20719 270 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 CD200P41217 278 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 CDX1P47902 265 aaPredicted RBP10.19□□□□□ -0.78
ABCA3-203ENST00000563623 RBM11P57052 281 aaKnown RBP10.19□□□□□ -0.78
ABCA3-203ENST00000563623 ERVFRD-1P60508 538 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 C10orf128Q5T292 105 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF818PQ6ZRF7 136 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 NEU1Q99519 415 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 PLK3Q9H4B4 646 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 IL36RNQ9UBH0 155 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 LOC102725191A0A1B0GVB3 256 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 A0A1W2PR80 420 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 SMCO3A2RU48 225 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 HBE1P02100 147 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 P04436 131 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 BCL3P20749 454 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 OTX2P32243 289 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 DSCR4P56555 118 aaPredicted RBP10.19□□□□□ -0.78
ABCA3-203ENST00000563623 HIKESHIQ53FT3 197 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF880Q6PDB4 577 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 MRPL21Q7Z2W9 205 aaKnown RBP10.19□□□□□ -0.78
ABCA3-203ENST00000563623 OR56B2PQ8NGI1 322 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 TMEM54Q969K7 222 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 FAM210BQ96KR6 192 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 SCRT1Q9BWW7 348 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 R4GN57 208 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 DNAJC13O75165 2243 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF816-ZNF321PA0A0X1KG74 233 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 PITX3O75364 302 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 CFIP05156 583 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 METTL15P1P0C7V9 234 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 MMP9P14780 707 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 NUTF2P61970 127 aaKnown RBP10.19□□□□□ -0.78
ABCA3-203ENST00000563623 HLA-DRB3P79483 266 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 TNFRSF9Q07011 255 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 ADIRFQ15847 76 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 WIPI1Q5MNZ9 446 aaPredicted RBP10.19□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF787Q6DD87 383 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 OR4D5Q8NGN0 318 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 FGFBP3Q8TAT2 258 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 HPSE2Q8WWQ2 592 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms