RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 C8orf86Q6ZUL3 223 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR2W3Q7Z3T1 314 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR51D1Q8NGF3 324 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR51A2Q8NGJ7 313 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR10K1Q8NGX5 313 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR5AK2Q8NH90 309 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 RFESDQ8TAC1 157 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 CHPT1Q8WUD6 406 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 BARHL1Q9BZE3 327 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 ERVK13-1Q9NX77 482 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 DHDHQ9UQ10 334 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 ORC6Q9Y5N6 252 aa13.19□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 A0A1W2PPE3 182 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 SNTNA6NMZ2 147 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 H3BNX3 289 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 FGF16O43320 207 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 ATP5HO75947 161 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 IGKV1D-33P01593 117 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 IGKV1-33P01594 117 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 CCDC159P0C7I6 412 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 RAB7AP51149 207 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 IL13RA2Q14627 380 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR8H3Q8N146 312 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 Q8NFD4 153 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 HAVCR2Q8TDQ0 301 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 TNFAIP8L1Q8WVP5 186 aa13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 TSEN15Q8WW01 171 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 RGP1Q92546 391 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 MRPL48Q96GC5 212 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 SERPINE3A8MV23 424 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 DYNC1I1O14576 645 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 CIB2O75838 187 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 IGHG2P01859 326 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 RAB3AP20336 220 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 SATL1Q86VE3 508 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 DPF1Q92782 380 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 P2RX4Q99571 388 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 GPR61Q9BZJ8 451 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 FAM192AQ9GZU8 254 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 AMBNQ9NP70 447 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 TAS2R4Q9NYW5 299 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 GMPPBQ9Y5P6 360 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 TENM3Q9P273 2699 aa13.17□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 LINC01548A6NM66 108 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 HSD17B6O14756 317 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 SOX2P48431 317 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 KCNJ3P48549 501 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 GTF2A1P52655 376 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 CD69Q07108 199 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 MRPL28Q13084 256 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 RSU1Q15404 277 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 ASCL4Q6XD76 172 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 SLC16A12Q6ZSM3 486 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 SLC35E3Q7Z769 313 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 STPG2Q8N412 459 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 CBR4Q8N4T8 237 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 SUMF2Q8NBJ7 301 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 KLHL30-AS1Q8NEE0 82 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR10A7Q8NGE5 316 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR10X1Q8NGY0 326 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 CPNE2Q96FN4 548 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 DUX3Q96PT4 197 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 MYCBPQ99417 103 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 GPER1Q99527 375 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 B9D2Q9BPU9 175 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 DPCDQ9BVM2 203 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 JAM3Q9BX67 310 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 ZFP57Q9NU63 452 aa13.16□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 NUDT19A8MXV4 375 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 MAGEB3O15480 346 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 CDRT1O95170 752 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 HTR3BO95264 441 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 SLC6A1P30531 599 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 MYCNOSP40205 109 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 REG1BP48304 166 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 ZNF816Q0VGE8 651 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 RAB40BQ12829 278 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 EBI3Q14213 229 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 XAF1Q6GPH4 301 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 OR52I1Q8NGK6 324 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 RHOXF1Q8NHV9 184 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 IFT22Q9H7X7 185 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 ST3GAL6Q9Y274 331 aa13.15□□□□□ -0.3
VPS9D1-AS1-201ENST00000562298 IGHV3-72A0A0B4J1Y9 119 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 IGHV1-3A0A0C4DH29 117 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 H0YHG0 523 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 VSIG8P0DPA2 414 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 GBX2P52951 348 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 SLC35B1P78383 322 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 NHLRC3Q5JS37 347 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 FAM53AQ6NSI3 398 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 MOB3BQ86TA1 216 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 FOXRED2Q8IWF2 684 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 COMMD1Q8N668 190 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 Q8N6K4 173 aa13.14□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 EAF1Q96JC9 268 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms