RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RBM39Q14498 530 aaKnown RBP10.96□□□□□ -0.65
CDH1-204ENST00000562118 HES5Q5TA89 166 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 GPR157Q5UAW9 335 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 RAB12Q6IQ22 244 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 BPIFB2Q8N4F0 458 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 OR13A1Q8NGR1 328 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 CYYR1Q96J86 154 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 ZNF48Q96MX3 618 aaPredicted RBP10.96□□□□□ -0.65
CDH1-204ENST00000562118 BARHL1Q9BZE3 327 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 MBNL3Q9NUK0 354 aaKnown RBP10.96□□□□□ -0.65
CDH1-204ENST00000562118 KIF25Q9UIL4 384 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 RAB22AQ9UL26 194 aa10.96□□□□□ -0.65
CDH1-204ENST00000562118 TRGV10A0A0A0MS01 117 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 TRBV6-6A0A0A6YYG2 114 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 KBTBD11-OT1A0A1B0GTJ5 212 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 POM121CA8CG34 1229 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 C15orf65H3BRN8 121 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 NAPSAO96009 420 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 MT-ND4P03905 459 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 CLEC2LP0C7M8 214 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 TGFBR1P36897 503 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 DLX1P56177 255 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 ZNF880Q6PDB4 577 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 Q6ZPA2 131 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 ZNF554Q86TJ5 538 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 OR10A7Q8NGE5 316 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 DYRK2Q92630 601 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 LHX4Q969G2 390 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 URM1Q9BTM9 101 aaKnown RBP10.95□□□□□ -0.66
CDH1-204ENST00000562118 GAL3ST2Q9H3Q3 398 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 PEX16Q9Y5Y5 336 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 SESN1Q9Y6P5 492 aa10.95□□□□□ -0.66
CDH1-204ENST00000562118 A0A0B4J203 849 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 hCG_1809904A0A1W2PP81 198 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 A0A1W2PPE2 198 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 A0A1W2PR64 198 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 A0A1W2PRV1 198 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 TMEM30CPA0ZSE6 113 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 MCRIP1C9JLW8 97 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 RAB27BO00194 218 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 HSPB6O14558 160 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 MMP23AO75900 390 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 SLC2A2P11168 524 aaPredicted RBP10.94□□□□□ -0.66
CDH1-204ENST00000562118 RPS19P39019 145 aaKnown RBP10.94□□□□□ -0.66
CDH1-204ENST00000562118 EFNB2P52799 333 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 HILS1P60008 231 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 MIDNQ504T8 468 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 PLAC9Q5JTB6 97 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 ATAD3CQ5T2N8 411 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 ZNF626Q68DY1 528 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 LDLRAD3Q86YD5 345 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 CROCCP3Q8IVE0 287 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 BCL6BQ8N143 479 aaPredicted RBP10.94□□□□□ -0.66
CDH1-204ENST00000562118 MRPL30Q8TCC3 161 aaKnown RBP10.94□□□□□ -0.66
CDH1-204ENST00000562118 SLC25A46Q96AG3 418 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 BCL7BQ9BQE9 202 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
CDH1-204ENST00000562118 NAA50Q9GZZ1 169 aaKnown RBP10.94□□□□□ -0.66
CDH1-204ENST00000562118 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDH1-204ENST00000562118 ANK2Q01484 3957 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 MEIKINA0A087WXM9 373 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 CLDN34H7C241 214 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 SOCS1O15524 211 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 ORC5O43913 435 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 GDNFP39905 211 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 RPL5P46777 297 aaKnown RBP10.93□□□□□ -0.66
CDH1-204ENST00000562118 NCS1P62166 190 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 KLRD1Q13241 179 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 DYNC1I2Q13409 638 aaKnown RBP10.93□□□□□ -0.66
CDH1-204ENST00000562118 FAM189A2Q15884 450 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 RUSC1-AS1Q66K80 236 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 BRICD5Q6PL45 260 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 BRD3OSQ6XYD6 125 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 C6orf201Q7Z4U5 140 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 RTN4RL2Q86UN3 420 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 ZNF565Q8N9K5 539 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 OR56B1Q8NGI3 324 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 SLC25A38Q96DW6 304 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 KIRREL1Q96J84 757 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 SLC6A7Q99884 636 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 SUCNR1Q9BXA5 334 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 TMEM133Q9H2Q1 129 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 HEXA-AS1Q9H8Q6 139 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 ETAA1Q9NY74 926 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 CALYQ9NYX4 217 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 KCNK7Q9Y2U2 307 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 ETV7Q9Y603 341 aa10.93□□□□□ -0.66
CDH1-204ENST00000562118 SMIM30A4D0T7 59 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 F2RL2O00254 374 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 MFNGO00587 321 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 NPFFO15130 113 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 IFNA2P01563 188 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 IGLV1-47P01700 117 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 GZMHP20718 246 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 FPR2P25090 351 aa10.92□□□□□ -0.66
CDH1-204ENST00000562118 BLVRBP30043 206 aaPredicted RBP10.92□□□□□ -0.66
CDH1-204ENST00000562118 TMEM30BQ3MIR4 351 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms