RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 LOC100506127A0A0U1RQW1 187 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 SLC5A10A0PJK1 596 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 MGAT4DA6NG13 374 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 A8MWL6 223 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 C16orf90A8MZG2 172 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 CD5P06127 495 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 HLA-GP17693 338 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 GDI2P50395 445 aaKnown RBP3.38□□□□□ -1.87
SMG1-204ENST00000561940 OR12D2P58182 307 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 TNNC1P63316 161 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 C2orf80Q0P641 193 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 ANGPT1Q15389 498 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 Q3ZCU0 254 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 ACTL10Q5JWF8 245 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 ZNF678Q5SXM1 525 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 CLEC19AQ6UXS0 136 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 FAM19A1Q7Z5A9 133 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 RBM45Q8IUH3 476 aaKnown RBP3.38□□□□□ -1.87
SMG1-204ENST00000561940 LGALS14Q8TCE9 139 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 TMIGD2Q96BF3 282 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 CPB2Q96IY4 423 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 SPACA5Q96QH8 159 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 METTL26Q96S19 204 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 PDCD1LG2Q9BQ51 273 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 FRMD8P1Q9BZ68 369 aaPredicted RBP3.38□□□□□ -1.87
SMG1-204ENST00000561940 SHCBP1LQ9BZQ2 653 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 ACOT13Q9NPJ3 140 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 RMND1Q9NWS8 449 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 DHCR7Q9UBM7 475 aaKnown RBP3.38□□□□□ -1.87
SMG1-204ENST00000561940 CLEC2DQ9UHP7 191 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 MAST2Q6P0Q8 1798 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 DOCK3Q8IZD9 2030 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 PLXNA3P51805 1871 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 RAB19A4D1S5 217 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 ZNF98A6NK75 572 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 SEC11BP0C7V7 166 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 CCL2P13500 99 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 GPR4P46093 362 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 RBX1P62877 108 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 RPL10AP62906 217 aaKnown RBP3.37□□□□□ -1.87
SMG1-204ENST00000561940 BTN1A1Q13410 526 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 GUSBP1Q15486 140 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 C18orf21Q32NC0 220 aaPredicted RBP3.37□□□□□ -1.87
SMG1-204ENST00000561940 FAHD1Q6P587 224 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 MORN3Q6PF18 240 aaPredicted RBP3.37□□□□□ -1.87
SMG1-204ENST00000561940 TBPL2Q6SJ96 375 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 ITPRIPQ8IWB1 547 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 NELFCDQ8IXH7 590 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 CCNYL1Q8N7R7 359 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 APCDD1LQ8NCL9 501 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 OR6K2Q8NGY2 324 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 OR52N1Q8NH53 320 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 KLF14Q8TD94 323 aaPredicted RBP3.37□□□□□ -1.87
SMG1-204ENST00000561940 DERL3Q96Q80 235 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 WDR55Q9H6Y2 383 aaPredicted RBP3.37□□□□□ -1.87
SMG1-204ENST00000561940 ZNF302Q9NR11 478 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 ACOT9Q9Y305 439 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 CHD7Q9P2D1 2997 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 NUP205Q92621 2012 aa3.37□□□□□ -1.87
SMG1-204ENST00000561940 HELZ2Q9BYK8 2649 aaKnown RBP3.37□□□□□ -1.87
SMG1-204ENST00000561940 GCN1Q92616 2671 aaKnown RBP3.37□□□□□ -1.87
SMG1-204ENST00000561940 OTOGLQ3ZCN5 2332 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 NUP98P52948 1817 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 PSME4Q14997 1843 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 CLDN34H7C241 214 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 ZNF593O00488 134 aaPredicted RBP3.36□□□□□ -1.87
SMG1-204ENST00000561940 CCL23P55773 120 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 FAM53BQ14153 422 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 MAPRE2Q15555 327 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 SYT6Q5T7P8 510 aaPredicted RBP3.36□□□□□ -1.87
SMG1-204ENST00000561940 LIN9Q5TKA1 542 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 GAPTQ8N292 157 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 FAM57AQ8TBR7 257 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 YIPF6Q96EC8 236 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 SMIM8Q96KF7 97 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 MRPL20Q9BYC9 149 aaKnown RBP3.36□□□□□ -1.87
SMG1-204ENST00000561940 C12orf4Q9NQ89 552 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 VAPAQ9P0L0 249 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 ANXA10Q9UJ72 324 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 KLF13Q9Y2Y9 288 aaPredicted RBP3.36□□□□□ -1.87
SMG1-204ENST00000561940 MGAMO43451 1857 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 PLXNA1Q9UIW2 1896 aa3.36□□□□□ -1.87
SMG1-204ENST00000561940 SPTA1P02549 2419 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 CACNA1DQ01668 2161 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 DNAH12Q6ZR08 3092 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 PRAMEF26H0Y7S4 382 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 CD8AP01732 235 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 CASQ1P31415 396 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 KRTAP10-10P60014 251 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 TOMM34Q15785 309 aaPredicted RBP3.35□□□□□ -1.87
SMG1-204ENST00000561940 RESP18Q5W5W9 173 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 FAM131AQ6UXB0 335 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 C16orf47Q6ZP98 133 aaPredicted RBP3.35□□□□□ -1.87
SMG1-204ENST00000561940 DAZ4Q86SG3 579 aaKnown RBP3.35□□□□□ -1.87
SMG1-204ENST00000561940 COPS4Q9BT78 406 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 MFSD1Q9H3U5 465 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 PRORYQ9H606 182 aa3.35□□□□□ -1.87
SMG1-204ENST00000561940 DAZ1Q9NQZ3 744 aaKnown RBP3.35□□□□□ -1.87
SMG1-204ENST00000561940 A0A0G2JMZ2 1700 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms