RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 FAM90A5PA8MXJ8 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 H3BSH0 61 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 M0R129 80 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 SIRPB1O00241 398 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 TOR1AO14656 332 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 MYL12BO14950 172 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 OR2H2O95918 312 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 CSN2P05814 226 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A15PP0C7V4 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A13PP0C7W8 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A14PP0C7W9 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM90A24PP0C7X0 464 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 UBCP0CG48 685 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM106CPP0CH98 169 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 CD36P16671 472 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 MYL12AP19105 171 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 PRKACBP22694 351 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 C21orf33P30042 268 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 GDNFP39905 211 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 MYCNOSP40205 109 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 POU3F4P49335 361 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 MTCP1P56278 107 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 RPL23AP62750 156 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 PDZK1IP1Q13113 114 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 C9orf152Q5JTZ5 239 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 UTS2BQ765I0 119 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 THNSL2Q86YJ6 484 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 CROCCP3Q8IVE0 287 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 PRSS35Q8N3Z0 413 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 TBX5Q99593 518 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF649Q9BS31 505 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 DCUN1D5Q9BTE7 237 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 JAM3Q9BX67 310 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 NAA50Q9GZZ1 169 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 FGF20Q9NP95 211 aaPredicted RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 EXOSC4Q9NPD3 245 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 ISYNA1Q9NPH2 558 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 ZFP57Q9NU63 452 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 CHCHD3Q9NX63 227 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 MOB4Q9Y3A3 225 aa9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 EXOSC1Q9Y3B2 195 aaKnown RBP9.38□□□□□ -0.91
CARMIL3-204ENST00000561354 LOC107986453A0A1B0GWG9 222 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 ODAMA1E959 279 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 FAM172BPA6NC97 362 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF729A6NN14 1252 aaPredicted RBP9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 CCRL2O00421 344 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 NHLRC4P0CG21 123 aaPredicted RBP9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 CALCBP10092 127 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 ATF1P18846 271 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 HTR1FP30939 366 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 PTGFRP43088 359 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 GLIPR1P48060 266 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 SNU13P55769 128 aaKnown RBP9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 AESQ08117 197 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 UNQ9370/PRO34162Q6UXP9 181 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 LHFPL2Q6ZUX7 228 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 ZNF329Q86UD4 541 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 OR4D6Q8NGJ1 314 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 CHPT1Q8WUD6 406 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 SPSB1Q96BD6 273 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 ADAT3Q96EY9 351 aaPredicted RBP9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 COMMD4Q9H0A8 199 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 RHOFQ9HBH0 211 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 AMBNQ9NP70 447 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 PCDHB16Q9NRJ7 776 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 GSTK1Q9Y2Q3 226 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 KIAA2026Q5HYC2 2103 aa9.37□□□□□ -0.91
CARMIL3-204ENST00000561354 IGKV1-12A0A0C4DH73 117 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 AIREO43918 545 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 KDM4BO94953 1096 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 IGKV1D-12P01611 117 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 KIR3DL2P43630 455 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 OR3A4PP47883 348 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 MLLT11Q13015 90 aaPredicted RBP9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 SPHARQ15513 63 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 C17orf58Q2M2W7 97 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 TMEM244Q5VVB8 128 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 OR2W3Q7Z3T1 314 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 RNF144BQ7Z419 303 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 RDH10Q8IZV5 341 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 COMMD1Q8N668 190 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 NANOGP1Q8N7R0 232 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 CHST4Q8NCG5 386 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 OR9G1Q8NH87 305 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 COQ2Q96H96 371 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 OPALINQ96PE5 141 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 P2RX4Q99571 388 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 MGLLQ99685 303 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 PLGRKTQ9HBL7 147 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 PALMDQ9NP74 551 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 A3GALT2U3KPV4 340 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 DNAH9Q9NYC9 4486 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 COL7A1Q02388 2944 aa9.36□□□□□ -0.91
CARMIL3-204ENST00000561354 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 FGF16O43320 207 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 RAMP3O60896 148 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 ISG15P05161 165 aa9.35□□□□□ -0.91
CARMIL3-204ENST00000561354 CGB3P0DN86 165 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms