RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 BCL7BQ9BQE9 202 aa1.31□□□□□ -2.2
PSMA4-221ENST00000560842 AICDAQ9GZX7 198 aa1.31□□□□□ -2.2
PSMA4-221ENST00000560842 ALX4Q9H161 411 aaPredicted RBP1.31□□□□□ -2.2
PSMA4-221ENST00000560842 GBF1Q92538 1859 aa1.31□□□□□ -2.2
PSMA4-221ENST00000560842 H3BP45 60 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 ATP5J2P56134 94 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 DSTNP60981 165 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 WDR43Q15061 677 aaKnown RBP eCLIP1.3□□□□□ -2.2
PSMA4-221ENST00000560842 STK38Q15208 465 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 SS18Q15532 418 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 TMEM176BQ3YBM2 270 aaPredicted RBP1.3□□□□□ -2.2
PSMA4-221ENST00000560842 ZNF321PQ8N8H1 164 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 OR4C16Q8NGL9 310 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 MFSD8Q8NHS3 518 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 CD200R1Q8TD46 325 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 GPR119Q8TDV5 335 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 PITX2Q99697 317 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 VCX3AQ9NNX9 186 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 RMND1Q9NWS8 449 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 MYO15BQ96JP2 1530 aa1.3□□□□□ -2.2
PSMA4-221ENST00000560842 CACNA1SQ13698 1873 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 F5H5T6 163 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 KLRC4-KLRK1H3BQV0 150 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 ZNF189O75820 626 aaPredicted RBP1.29□□□□□ -2.2
PSMA4-221ENST00000560842 IGKV5-2P06315 115 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 DNASE1L1P49184 302 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 C1QTNF8P60827 252 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 STX4Q12846 297 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 HNRNPA1L2Q32P51 320 aaKnown RBP1.29□□□□□ -2.2
PSMA4-221ENST00000560842 NIPAL1Q6NVV3 410 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 LGALS14Q8TCE9 139 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 CDKL2Q92772 493 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 DNAJC30Q96LL9 226 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 MTCH2Q9Y6C9 303 aa1.29□□□□□ -2.2
PSMA4-221ENST00000560842 FAM183AA6NL82 134 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 SC5DO75845 299 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 S100A2P29034 98 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 CRABP1P29762 137 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 TSPOP30536 169 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 GTF2H1P32780 548 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 GABRA4P48169 554 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 HBG1P69891 147 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 HBG2P69892 147 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 OR8G1Q15617 311 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 ACSBG2Q5FVE4 666 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 SSX7Q7RTT5 188 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 FAM58AQ8N1B3 248 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 OR4K17Q8NGC6 315 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 OR5C1Q8NGR4 320 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 MITD1Q8WV92 249 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 CLDN23Q96B33 292 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 CIB1Q99828 191 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 BEX2Q9BXY8 128 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 POMPQ9Y244 141 aa1.28□□□□□ -2.2
PSMA4-221ENST00000560842 TBL2Q9Y4P3 447 aaKnown RBP1.28□□□□□ -2.2
PSMA4-221ENST00000560842 OTOFQ9HC10 1997 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 COL4A1P02462 1669 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 LOC102725191A0A1B0GVB3 256 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 EEF1E1O43324 174 aaKnown RBP1.27□□□□□ -2.21
PSMA4-221ENST00000560842 SLC25A20O43772 301 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 SPOPO43791 374 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 LTAP01374 205 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 INPP1P49441 399 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 ZNF140P52738 457 aaPredicted RBP1.27□□□□□ -2.21
PSMA4-221ENST00000560842 RHOAP61586 193 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 APOFQ13790 326 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 VAMP3Q15836 100 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 FAM162BQ5T6X4 162 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 LAMTOR1Q6IAA8 161 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 SLC25A25Q6KCM7 469 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 TMEM25Q86YD3 366 aa1.27□□□□□ -2.21
PSMA4-221ENST00000560842 IGKV1-12A0A0C4DH73 117 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 C19orf71A6NCJ1 209 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 DENRO43583 198 aaKnown RBP1.26□□□□□ -2.21
PSMA4-221ENST00000560842 IGKV1D-12P01611 117 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 CEACAM21Q3KPI0 293 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 Q6ZT83 130 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 ASCC1Q8N9N2 400 aaKnown RBP1.26□□□□□ -2.21
PSMA4-221ENST00000560842 ACBD4Q8NC06 268 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 OR8G5Q8NG78 346 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 ZMYND19Q96E35 227 aaPredicted RBP1.26□□□□□ -2.21
PSMA4-221ENST00000560842 ZNF251Q9BRH9 671 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 EBPLQ9BY08 206 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 ATAD5Q96QE3 1844 aa1.26□□□□□ -2.21
PSMA4-221ENST00000560842 A0A1W2PQL4 384 aaPredicted RBP1.25□□□□□ -2.21
PSMA4-221ENST00000560842 I3L4J1 428 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 CDIPTO14735 213 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 ZNF3P17036 446 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 FAM183BPQ6ZVS7 135 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 FAM19A3Q7Z5A8 133 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 ZFAND2AQ8N6M9 145 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 GATD1Q8NB37 220 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 OR2AE1Q8NHA4 323 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 APOL4Q9BPW4 351 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 COPS4Q9BT78 406 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 KCNIP2Q9NS61 270 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 BTRCQ9Y297 605 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 CHTOPQ9Y3Y2 248 aaKnown RBP1.25□□□□□ -2.21
PSMA4-221ENST00000560842 HEY1Q9Y5J3 304 aa1.25□□□□□ -2.21
PSMA4-221ENST00000560842 MUC21A0A0G2JKD1 596 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms