RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 AANATQ16613 207 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 MINOS1Q5TGZ0 78 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 RSBN1Q5VWQ0 802 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 Q6ZSV7 163 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 RTN4RL2Q86UN3 420 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 OR13A1Q8NGR1 328 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 LINC01006Q8NI28 216 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 RFESDQ8TAC1 157 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 FAM46BQ96A09 425 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 UQCC2Q9BRT2 126 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 SPACA1Q9HBV2 294 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 CALYQ9NYX4 217 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 MINOS1-NBL1R4GNA1 71 aa10.5□□□□□ -0.73
CTDSPL2-209ENST00000560620 TMEM30CPA0ZSE6 113 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 MCRIP1C9JLW8 97 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 IGHV3-7P01780 117 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 MGMTP16455 207 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 SRMP19623 302 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 GABRA5P31644 462 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 GDNFP39905 211 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 CEACAM3P40198 252 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 ARHGDIBP52566 201 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 RPS25P62851 125 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 MLLT11Q13015 90 aaPredicted RBP10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 TRAM1Q15629 374 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 C17orf58Q2M2W7 97 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 ARSJQ5FYB0 599 aaPredicted RBP10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 SLC35E4Q6ICL7 350 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 UNQ9370/PRO34162Q6UXP9 181 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 CCDC107Q8WV48 283 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 MRPS24Q96EL2 167 aaKnown RBP10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 KIRREL1Q96J84 757 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 MGLLQ99685 303 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 CST11Q9H112 138 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 IFT22Q9H7X7 185 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 ZNF286AQ9HBT8 521 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 IDI2-AS1Q9NZ38 188 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 PITPNC1Q9UKF7 332 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 PEX16Q9Y5Y5 336 aa10.49□□□□□ -0.73
CTDSPL2-209ENST00000560620 AIPO00170 330 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 ARL6IP5O75915 188 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 MPIG6BO95866 241 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 IL1AP01583 271 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 JUNBP17275 347 aaPredicted RBP10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 PSMA1P25786 263 aaKnown RBP10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 SSTR5P35346 364 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 GNG10P50151 68 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 SRSF4Q08170 494 aaKnown RBP10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 TPBGQ13641 420 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 LDLRAD2Q5SZI1 272 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 RAB12Q6IQ22 244 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 LIAT1Q6ZQX7 453 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 TMEM219Q86XT9 240 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 TMEM104Q8NE00 496 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 OR4P4Q8NGL7 312 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 WFDC12Q8WWY7 111 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 PHYHIPQ92561 330 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 LEAP2Q969E1 77 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 CREB3L1Q96BA8 519 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 NPFFR1Q9GZQ6 430 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 NCOR1P1Q9H4R4 102 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 PLGRKTQ9HBL7 147 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 ISYNA1Q9NPH2 558 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 ETAA1Q9NY74 926 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 DPM3Q9P2X0 92 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 GHRLQ9UBU3 117 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 TRAPPC2LQ9UL33 140 aa10.48□□□□□ -0.73
CTDSPL2-209ENST00000560620 UBE2QL1A1L167 161 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 VGLL3A8MV65 326 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 LEUTXA8MZ59 168 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 UCHL1P09936 223 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 UBBP0CG47 229 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 CPEP16870 476 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 GZMHP20718 246 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 CALRP27797 417 aaKnown RBP10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 HTR2CP28335 458 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 BRS3P32247 399 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 TBCEQ15813 527 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 HLA-DRB5Q30154 266 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 NKAPLQ5M9Q1 402 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 ZNF367Q7RTV3 350 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 LRRTM1Q86UE6 522 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 PRR18Q8N4B5 295 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 OR9G1Q8NH87 305 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 OR2T6Q8NHC8 308 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 UBALD1Q8TB05 177 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 PIFOQ8TCI5 191 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 CAPSLQ8WWF8 208 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 ARL11Q969Q4 196 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 C16orf95Q9H693 158 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 TCF19Q9Y242 345 aa10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 AMMECR1Q9Y4X0 333 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL2-209ENST00000560620 ANK2Q01484 3957 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 BUB1B-PAK6H3BSN5 160 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 CHST1O43916 411 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 SC5DO75845 299 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 TSPAN9O75954 239 aa10.46□□□□□ -0.73
CTDSPL2-209ENST00000560620 FUT3P21217 361 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms