RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 OBP2BQ9NPH6 170 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 PARP11Q9NR21 331 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 CARHSP1Q9Y2V2 147 aaKnown RBP6.9□□□□□ -1.3
SMAD3-212ENST00000559937 UBE2J1Q9Y385 318 aaPredicted RBP6.9□□□□□ -1.3
SMAD3-212ENST00000559937 SPEGQ15772 3267 aa6.9□□□□□ -1.31
SMAD3-212ENST00000559937 ZFYVE26Q68DK2 2539 aa6.9□□□□□ -1.31
SMAD3-212ENST00000559937 TRAV24A0A0B4J272 114 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 LOC105371267A0A1B0GV96 52 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF705EA8MWA4 302 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-212ENST00000559937 H0Y980 276 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 KCNAB3O43448 404 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 CEACAM4O75871 244 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 ATG12O94817 140 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 SCGB1D2O95969 90 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 APOC3P02656 99 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 SCTP09683 121 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 SLC25A6P12236 298 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 PVALBP20472 110 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-212ENST00000559937 COX5AP20674 150 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 IGHV1-2P23083 117 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 EIF2S3P41091 472 aaKnown RBP6.89□□□□□ -1.31
SMAD3-212ENST00000559937 RAB5CP51148 216 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 TMEM33P57088 247 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 ERVK11-1P61568 191 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF273Q14593 569 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 GNMTQ14749 295 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 HERPUD1Q15011 391 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 SP6Q3SY56 376 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 SPIN3Q5JUX0 258 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 OR2T2Q6IF00 324 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 Q6P435 159 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 PCSK4Q6UW60 755 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 BTNL8Q6UX41 500 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 TBC1D26Q86UD7 250 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 FOXRED2Q8IWF2 684 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 CMTM1Q8IZ96 169 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 H1FOOQ8IZA3 346 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-212ENST00000559937 C17orf78Q8N4C9 275 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 SLC35G3Q8N808 338 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 DEFB124Q8NES8 71 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 OR5D13Q8NGL4 314 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 OR11L1Q8NGX0 322 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 KIRREL1Q96J84 757 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 TP53RKQ96S44 253 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 GINS3Q9BRX5 216 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 OR2S2Q9NQN1 319 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 FAM212BQ9NTI7 297 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF629Q9UEG4 869 aaPredicted RBP6.89□□□□□ -1.31
SMAD3-212ENST00000559937 OR2W1Q9Y3N9 320 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 ZZEF1O43149 2961 aa6.89□□□□□ -1.31
SMAD3-212ENST00000559937 KMT2BQ9UMN6 2715 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 CHD3Q12873 2000 aaKnown RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 IGKV1-6A0A0C4DH72 117 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF891A8MT65 544 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 AHRRA9YTQ3 701 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 LILRA1O75019 489 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 PGA5P0DJD9 388 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 VDAC1P21796 283 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 CA6P23280 308 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 HOXC12P31275 282 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 NKX2-1P43699 371 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 CAV2P51636 162 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 CCL11P51671 97 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 F2RL1P55085 397 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 BTN1A1Q13410 526 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF146Q15072 292 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 TSC22D1Q15714 1073 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 PXDC1Q5TGL8 231 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF324BQ6AW86 544 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 FIP1L1Q6UN15 594 aaKnown RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF818PQ6ZRF7 136 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 TMPRSS7Q7RTY8 843 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF695Q8IW36 515 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 SELENOHQ8IZQ5 122 aaKnown RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 SVBPQ8N300 66 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 SCCPDHQ8NBX0 429 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 DMBX1Q8NFW5 382 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 OR10J5Q8NHC4 309 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 LYPD6BQ8NI32 183 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 SECTM1Q8WVN6 248 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 LRRC46Q96FV0 321 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 AKR1E2Q96JD6 320 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 HS3ST6Q96QI5 342 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 TRIB1Q96RU8 372 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 USB1Q9BQ65 265 aaKnown RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 NRIP2Q9BQI9 281 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 ADAT1Q9BUB4 502 aaKnown RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 SEC11CQ9BY50 192 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 NKX6-2Q9C056 277 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 SLC25A31Q9H0C2 315 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 IL36RNQ9UBH0 155 aa6.88□□□□□ -1.31
SMAD3-212ENST00000559937 RCL1Q9Y2P8 373 aaKnown RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 STRAPQ9Y3F4 350 aaKnown RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 ANKRD11Q6UB99 2663 aaPredicted RBP6.88□□□□□ -1.31
SMAD3-212ENST00000559937 FAM208BQ5VWN6 2430 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 ACACAQ13085 2346 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 IGKV1D-13A0A0B4J2D9 117 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 NKX2-6A6NCS4 301 aa6.87□□□□□ -1.31
SMAD3-212ENST00000559937 SH2D1BO14796 132 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms