RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 GRK1Q15835 563 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 PAN3Q58A45 887 aaKnown RBP13.84□□□□□ -0.19
PSEN1-224ENST00000559361 FOXB2Q5VYV0 432 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 C17orf107Q6ZR85 190 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 GDPD3Q7L5L3 318 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 SAMD12Q8N8I0 201 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 SUMF2Q8NBJ7 301 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 ZNRF1Q8ND25 227 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 S100A16Q96FQ6 103 aaKnown RBP13.84□□□□□ -0.19
PSEN1-224ENST00000559361 ZNF48Q96MX3 618 aaPredicted RBP13.84□□□□□ -0.19
PSEN1-224ENST00000559361 DPCDQ9BVM2 203 aaPredicted RBP13.84□□□□□ -0.19
PSEN1-224ENST00000559361 SLIRPQ9GZT3 109 aaKnown RBP13.84□□□□□ -0.19
PSEN1-224ENST00000559361 KCNK15Q9H427 330 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 NCOR1P1Q9H4R4 102 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 ZNF69Q9UC07 566 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 NUP50Q9UKX7 468 aa13.84□□□□□ -0.19
PSEN1-224ENST00000559361 PSPNO60542 156 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 CHATP28329 748 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 BLVRBP30043 206 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-224ENST00000559361 OR3A1P47881 315 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 CEBPDP49716 269 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-224ENST00000559361 VEGFCP49767 419 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 LCN2P80188 198 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 KLF17Q5JT82 389 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-224ENST00000559361 ATAD3CQ5T2N8 411 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 BCL6BQ8N143 479 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-224ENST00000559361 OR10R2Q8NGX6 335 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 SLC25A38Q96DW6 304 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 RAB3CQ96E17 227 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 NXF2Q9GZY0 626 aaKnown RBP13.83□□□□□ -0.2
PSEN1-224ENST00000559361 ATG5Q9H1Y0 275 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 MMP27Q9H306 513 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 DIABLOQ9NR28 239 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 PLEKHJ1Q9NW61 149 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 COMMD3Q9UBI1 195 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 MMP24Q9Y5R2 645 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 PEX16Q9Y5Y5 336 aa13.83□□□□□ -0.2
PSEN1-224ENST00000559361 A0A0A6YYD4 124 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 A0A1W2PPH5 198 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 TMEM82A0PJX8 343 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 FOXI3A8MTJ6 420 aaPredicted RBP13.82□□□□□ -0.2
PSEN1-224ENST00000559361 SERPINE3A8MV23 424 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 RAB27BO00194 218 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 TPPPO94811 219 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 LIPFP07098 398 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 NDUFB7P17568 137 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 EFNB2P52799 333 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 MEF2CQ06413 473 aaPredicted RBP13.82□□□□□ -0.2
PSEN1-224ENST00000559361 SIGIRRQ6IA17 410 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 OR5H6Q8NGV6 325 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 ST8SIA4Q92187 359 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 NICN1Q9BSH3 213 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 DCUN1D5Q9BTE7 237 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.82□□□□□ -0.2
PSEN1-224ENST00000559361 MMP26Q9NRE1 261 aa13.82□□□□□ -0.2
PSEN1-224ENST00000559361 ENSAO43768 121 aaKnown RBP13.81□□□□□ -0.2
PSEN1-224ENST00000559361 P2RX3P56373 397 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 BAMBIQ13145 260 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 Q6ZTK2 550 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 MCFD2Q8NI22 146 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 C8orf46Q8TAG6 207 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 NEK7Q8TDX7 302 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 DCTN5Q9BTE1 182 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 PPA2Q9H2U2 334 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 RIMS4Q9H426 269 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-224ENST00000559361 RABL2AQ9UBK7 228 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-224ENST00000559361 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 NBEAL2Q6ZNJ1 2754 aa13.81□□□□□ -0.2
PSEN1-224ENST00000559361 A0A1B0GW55 424 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 SOCS1O15524 211 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 XRCC3O43542 346 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 GSTP1P09211 210 aaKnown RBP13.8□□□□□ -0.2
PSEN1-224ENST00000559361 DUX4L2P0CJ85 424 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 DUX4L3P0CJ86 424 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 DUX4L4P0CJ87 422 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 DUX4L5P0CJ88 424 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 DUX4L6P0CJ89 424 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 DUX4L7P0CJ90 424 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 SELLP14151 372 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 HIST1H1DP16402 221 aaKnown RBP13.8□□□□□ -0.2
PSEN1-224ENST00000559361 MDKP21741 143 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-224ENST00000559361 TALDO1P37837 337 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 SEC61A1P61619 476 aaKnown RBP13.8□□□□□ -0.2
PSEN1-224ENST00000559361 SLC9A3R2Q15599 337 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 NKAPLQ5M9Q1 402 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 SLC35E4Q6ICL7 350 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 DUX4L9Q6RFH8 374 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-224ENST00000559361 BTN2A1Q7KYR7 527 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 OR4S1Q8NGB4 309 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 C15orf40Q8WUR7 153 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 TAF15Q92804 592 aaKnown RBP eCLIP13.8□□□□□ -0.2
PSEN1-224ENST00000559361 C6orf62Q9GZU0 229 aaPredicted RBP13.8□□□□□ -0.2
PSEN1-224ENST00000559361 CHST6Q9GZX3 395 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 OR6C3Q9NZP0 311 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 DUX4Q9UBX2 424 aa13.8□□□□□ -0.2
PSEN1-224ENST00000559361 RPUSD1Q9UJJ7 312 aaKnown RBP13.8□□□□□ -0.2
PSEN1-224ENST00000559361 hADV38S2A0JD32 116 aa13.79□□□□□ -0.2
PSEN1-224ENST00000559361 TMEM30CPA0ZSE6 113 aa13.79□□□□□ -0.2
PSEN1-224ENST00000559361 HSPB6O14558 160 aa13.79□□□□□ -0.2
PSEN1-224ENST00000559361 RGS5O15539 181 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms