RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 UBE2QL1A1L167 161 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 RNASEK-C17orf49H0YIS7 233 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 RBP4P02753 201 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 RPS19P39019 145 aaKnown RBP20.92■□□□□ 0.94
SMAD6-202ENST00000557916 NCR3LG1Q68D85 454 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 BRD3OSQ6XYD6 125 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 ZNF565Q8N9K5 539 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 GAL3ST2Q9H3Q3 398 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 TAS2R3Q9NYW6 316 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 SCOCQ9UIL1 159 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 IGHV1-69DA0A0B4J2H0 117 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 SOCS1O15524 211 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 GABARAPO95166 117 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 IL1AP01583 271 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 IGHV1-69P01742 117 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 FPR2P25090 351 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 GLP1RP43220 463 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 VEGFCP49767 419 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 EFNB2P52799 333 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 BPIFB3P59826 476 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 KLRD1Q13241 179 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 IDNKQ5T6J7 187 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 ZNF497Q6ZNH5 498 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 OR13A1Q8NGR1 328 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 CYYR1Q96J86 154 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 HEXA-AS1Q9H8Q6 139 aa20.91■□□□□ 0.94
SMAD6-202ENST00000557916 JMJD1CQ15652 2540 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 IGHV1-8P0DP01 117 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 RAB6AP20340 208 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 SERPINB10P48595 397 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 RIPPLY3P57055 190 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 GUCA2AQ02747 115 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 RUSC1-AS1Q66K80 236 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 ZNF782Q6ZMW2 699 aaPredicted RBP20.9■□□□□ 0.94
SMAD6-202ENST00000557916 C6orf201Q7Z4U5 140 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 OR56B1Q8NGI3 324 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 PTX4Q96A99 478 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 SULT4A1Q9BR01 284 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 OCEL1Q9H607 264 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 PLEKHJ1Q9NW61 149 aa20.9■□□□□ 0.94
SMAD6-202ENST00000557916 ZNF729A6NN14 1252 aaPredicted RBP20.89■□□□□ 0.94
SMAD6-202ENST00000557916 CA11O75493 328 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 IFNA2P01563 188 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 MT-ND4P03905 459 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 SNRPBP14678 240 aaKnown RBP20.89■□□□□ 0.94
SMAD6-202ENST00000557916 FAM189A2Q15884 450 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 CTF1Q16619 201 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 CROCCP3Q8IVE0 287 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 BCL6BQ8N143 479 aaPredicted RBP20.89■□□□□ 0.94
SMAD6-202ENST00000557916 MRGPRDQ8TDS7 321 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 DYRK2Q92630 601 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 FAAP24Q9BTP7 215 aa20.89■□□□□ 0.94
SMAD6-202ENST00000557916 TRAV39A0A0B4J263 110 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 FOXI3A8MTJ6 420 aaPredicted RBP20.88■□□□□ 0.93
SMAD6-202ENST00000557916 CLPXO76031 633 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 PAHP00439 452 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 UBE2E1P51965 193 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 HCP5Q6MZN7 132 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 C9orf139Q6ZV77 190 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 CCDC107Q8WV48 283 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 SLC6A7Q99884 636 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 C2CD3Q4AC94 2353 aa20.88■□□□□ 0.93
SMAD6-202ENST00000557916 KBTBD11-OT1A0A1B0GTJ5 212 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 A0A1W2PRD5 423 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 A0A1W2PRF3 423 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 A0A1W2PRM7 423 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 METTL21EPA6NDL7 271 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 CGB3P0DN86 165 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 CGB7P0DN87 165 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 CDK2P24941 298 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 TMEM50BP56557 158 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 C17orf58Q2M2W7 97 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 GAPTQ8N292 157 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 LGALS14Q8TCE9 139 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 CALYQ9NYX4 217 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 SOX21Q9Y651 276 aaPredicted RBP20.87■□□□□ 0.93
SMAD6-202ENST00000557916 SESN1Q9Y6P5 492 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 KIAA2026Q5HYC2 2103 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 TMEM127O75204 238 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 MMP23AO75900 390 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 COX7A1P24310 79 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 PRAMEF5Q5TYX0 476 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 HEPN1Q6WQI6 88 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 Q6ZTK2 550 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 RTN4RL2Q86UN3 420 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 CLVS1Q8IUQ0 354 aaPredicted RBP20.87■□□□□ 0.93
SMAD6-202ENST00000557916 PNKDQ8N490 385 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 OR4K15Q8NH41 348 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 ARHGAP5-AS1Q96IT6 56 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 TRAPPC2LQ9UL33 140 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 HSF4Q9ULV5 492 aa20.87■□□□□ 0.93
SMAD6-202ENST00000557916 GZMHP20718 246 aa20.86■□□□□ 0.93
SMAD6-202ENST00000557916 OMGP23515 440 aa20.86■□□□□ 0.93
SMAD6-202ENST00000557916 SCAND1P57086 179 aa20.86■□□□□ 0.93
SMAD6-202ENST00000557916 OR13D1Q8NGV5 346 aa20.86■□□□□ 0.93
SMAD6-202ENST00000557916 SLC25A46Q96AG3 418 aa20.86■□□□□ 0.93
SMAD6-202ENST00000557916 PECRQ9BY49 303 aa20.86■□□□□ 0.93
SMAD6-202ENST00000557916 ATG5Q9H1Y0 275 aa20.86■□□□□ 0.93
SMAD6-202ENST00000557916 NPFFO15130 113 aa20.85■□□□□ 0.93
SMAD6-202ENST00000557916 MOGAT2Q3SYC2 334 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms