RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ISG20L2Q9H9L3 353 aaKnown RBP12.58□□□□□ -0.4
SCFD1-224ENST00000557713 LINC01548A6NM66 108 aa12.57□□□□□ -0.4
SCFD1-224ENST00000557713 ZFPL1O95159 310 aa12.57□□□□□ -0.4
SCFD1-224ENST00000557713 ALPLP05186 524 aa12.57□□□□□ -0.4
SCFD1-224ENST00000557713 EBI3Q14213 229 aa12.57□□□□□ -0.4
SCFD1-224ENST00000557713 GALEQ14376 348 aa12.57□□□□□ -0.4
SCFD1-224ENST00000557713 ZNF529Q6P280 563 aa12.57□□□□□ -0.4
SCFD1-224ENST00000557713 LHFPL3Q86UP9 236 aa12.57□□□□□ -0.4
SCFD1-224ENST00000557713 COMMD1Q8N668 190 aa12.57□□□□□ -0.4
SCFD1-224ENST00000557713 NUDT19A8MXV4 375 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 E9PI62 339 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 H0YHG0 523 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 IGKV1D-33P01593 117 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 IGKV1-33P01594 117 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 RPSAP08865 295 aaKnown RBP12.56□□□□□ -0.4
SCFD1-224ENST00000557713 KCNJ3P48549 501 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 GNG10P50151 68 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 SLC35B1P78383 322 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 IL13RA2Q14627 380 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 ZSCAN26Q16670 478 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 LTC4SQ16873 150 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 UNQ9370/PRO34162Q6UXP9 181 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 ASCL4Q6XD76 172 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 SLC35E3Q7Z769 313 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 ZNF695Q8IW36 515 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 SYS1Q8N2H4 156 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 STPG2Q8N412 459 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 KLHL30-AS1Q8NEE0 82 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 MRGPRDQ8TDS7 321 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 ALG8Q9BVK2 526 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 AASSQ9UDR5 926 aa12.56□□□□□ -0.4
SCFD1-224ENST00000557713 TRAV39A0A0B4J263 110 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 A0A1W2PPE3 182 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 TMEM212A6NML5 194 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 GABRPO00591 440 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 SSTR5P35346 364 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 RASSF2P50749 326 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 DGCR2P98153 550 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 ZNF816Q0VGE8 651 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-224ENST00000557713 DCTN2Q13561 401 aaKnown RBP12.55□□□□□ -0.4
SCFD1-224ENST00000557713 PIGYQ3MUY2 71 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 FOXRED2Q8IWF2 684 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 Q8N6K4 173 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 OR5AK2Q8NH90 309 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 MRPL48Q96GC5 212 aaKnown RBP12.55□□□□□ -0.4
SCFD1-224ENST00000557713 RAX2Q96IS3 184 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 MYCBPQ99417 103 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-224ENST00000557713 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
SCFD1-224ENST00000557713 DHDHQ9UQ10 334 aa12.55□□□□□ -0.4
SCFD1-224ENST00000557713 IGHV1-3A0A0C4DH29 117 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 SNTNA6NMZ2 147 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 HSD17B6O14756 317 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 GAPDHP04406 335 aaKnown RBP12.54□□□□□ -0.4
SCFD1-224ENST00000557713 GABRB1P18505 474 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 RAB3AP20336 220 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 ZIK1Q3SY52 487 aaPredicted RBP12.54□□□□□ -0.4
SCFD1-224ENST00000557713 LPCAT4Q643R3 524 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 SUMF2Q8NBJ7 301 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 OR51A2Q8NGJ7 313 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 OR10K1Q8NGX5 313 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 OR10X1Q8NGY0 326 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 TNFAIP8L1Q8WVP5 186 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 EAF1Q96JC9 268 aaPredicted RBP12.54□□□□□ -0.4
SCFD1-224ENST00000557713 DUX3Q96PT4 197 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 DPCDQ9BVM2 203 aaPredicted RBP12.54□□□□□ -0.4
SCFD1-224ENST00000557713 ZNF581Q9P0T4 197 aa12.54□□□□□ -0.4
SCFD1-224ENST00000557713 CCL24O00175 119 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 EI24O14681 340 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 GZMHP20718 246 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 GPR12P47775 334 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 GP2P55259 537 aaKnown RBP12.53□□□□□ -0.4
SCFD1-224ENST00000557713 MRPL28Q13084 256 aaKnown RBP12.53□□□□□ -0.4
SCFD1-224ENST00000557713 RSU1Q15404 277 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 PNLIPRP3Q17RR3 467 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 TEX38Q6PEX7 206 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 MOB3BQ86TA1 216 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 SATL1Q86VE3 508 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 LINC00311Q8N616 119 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 TSEN15Q8WW01 171 aaKnown RBP12.53□□□□□ -0.4
SCFD1-224ENST00000557713 TFAP2CQ92754 450 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 CPNE2Q96FN4 548 aaPredicted RBP12.53□□□□□ -0.4
SCFD1-224ENST00000557713 GPER1Q99527 375 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 ABCG5Q9H222 651 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 IFT22Q9H7X7 185 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 DCLRE1BQ9H816 532 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 LIN7CQ9NUP9 197 aaKnown RBP12.53□□□□□ -0.4
SCFD1-224ENST00000557713 ERVK13-1Q9NX77 482 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 FAM53CQ9NYF3 392 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 LSM4Q9Y4Z0 139 aaKnown RBP12.53□□□□□ -0.4
SCFD1-224ENST00000557713 ORC6Q9Y5N6 252 aa12.53□□□□□ -0.4
SCFD1-224ENST00000557713 IGHV3-72A0A0B4J1Y9 119 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 C15orf65H3BRN8 121 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 AP4M1O00189 453 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 CCRL2O00421 344 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 MAGEB3O15480 346 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 RAMP3O60896 148 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 ATP5HO75947 161 aa12.52□□□□□ -0.41
SCFD1-224ENST00000557713 HTR3BO95264 441 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms