RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 OR10A7Q8NGE5 316 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 OR8J1Q8NGP2 316 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 HAVCR2Q8TDQ0 301 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 RFKQ969G6 155 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 RPEQ96AT9 228 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 ADAT3Q96EY9 351 aaPredicted RBP6.84□□□□□ -1.31
VRK1-206ENST00000557222 OPALINQ96PE5 141 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 IL4I1Q96RQ9 567 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 ZNF649Q9BS31 505 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 GON7Q9BXV9 100 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 GSTK1Q9Y2Q3 226 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.31
VRK1-206ENST00000557222 IGKV1-12A0A0C4DH73 117 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 G3V2T6 193 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 C3orf84H3BNL1 204 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 J3QR06 171 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 SLC33A1O00400 549 aaPredicted RBP6.83□□□□□ -1.32
VRK1-206ENST00000557222 INMTO95050 263 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 IGKV1D-12P01611 117 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 DBTP11182 482 aaKnown RBP6.83□□□□□ -1.32
VRK1-206ENST00000557222 ZNF20P17024 532 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 EPHA2P29317 976 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 C21orf33P30042 268 aaPredicted RBP6.83□□□□□ -1.32
VRK1-206ENST00000557222 ATP6V1E1P36543 226 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 KIR3DL2P43630 455 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 KCNJ3P48549 501 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 CCR9P51686 369 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 MADCAM1Q13477 382 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 EBI3Q14213 229 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 C17orf58Q2M2W7 97 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 STEAP3Q658P3 488 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 BAIAP2L2Q6UXY1 529 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 RNF144BQ7Z419 303 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 ZNF695Q8IW36 515 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 FOXRED2Q8IWF2 684 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 C5orf56Q8N8D9 126 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 OR10H4Q8NGA5 316 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 OR51T1Q8NGJ9 327 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 OR2G2Q8NGZ5 317 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 BCAS4Q8TDM0 211 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 TOMM40LQ969M1 308 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 FGGYQ96C11 551 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 COQ2Q96H96 371 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 MYCBPQ99417 103 aaPredicted RBP6.83□□□□□ -1.32
VRK1-206ENST00000557222 TBX5Q99593 518 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 BARHL1Q9BZE3 327 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 GABARAPL1Q9H0R8 117 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 POMPQ9Y244 141 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 LSM4Q9Y4Z0 139 aaKnown RBP6.83□□□□□ -1.32
VRK1-206ENST00000557222 SIRT4Q9Y6E7 314 aaPredicted RBP6.83□□□□□ -1.32
VRK1-206ENST00000557222 U3KQK5 164 aa6.83□□□□□ -1.32
VRK1-206ENST00000557222 SORL1Q92673 2214 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 A0A1W2PPI3 338 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 SERPINE3A8MV23 424 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 NPIPB11E5RHQ5 1161 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 DEGS1O15121 323 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 GYG2O15488 501 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 SNRNP70P08621 437 aaKnown RBP6.82□□□□□ -1.32
VRK1-206ENST00000557222 OCM2P0CE71 109 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 OCMP0CE72 109 aaPredicted RBP6.82□□□□□ -1.32
VRK1-206ENST00000557222 ZNF44P15621 663 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 TMEM11P17152 192 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 MTNR1BP49286 362 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 ZNF85Q03923 595 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 RBM39Q14498 530 aaKnown RBP6.82□□□□□ -1.32
VRK1-206ENST00000557222 KIR2DS1Q14954 304 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 ATP6AP1Q15904 470 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 KLHL22Q53GT1 634 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 ELP2Q6IA86 826 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 TEX38Q6PEX7 206 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 ZNF329Q86UD4 541 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 RDH10Q8IZV5 341 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 TRUB1Q8WWH5 349 aaKnown RBP6.82□□□□□ -1.32
VRK1-206ENST00000557222 OSBPL10Q9BXB5 764 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 IDI2-AS1Q9NZ38 188 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 GNG8Q9UK08 70 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 DNAH1Q9P2D7 4330 aa6.82□□□□□ -1.32
VRK1-206ENST00000557222 SH2D7A6NKC9 451 aaPredicted RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 H3BSH0 61 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 M0R129 80 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 CCL24O00175 119 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 AP4M1O00189 453 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 CCRL2O00421 344 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 MITFO75030 526 aaPredicted RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 APOL3O95236 402 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 IL1AP01583 271 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 ELANEP08246 267 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 GZMHP20718 246 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 NFYBP25208 207 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 CDX1P47902 265 aaPredicted RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 SNU13P55769 128 aaKnown RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 SCN1BQ07699 218 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 ZNF816Q0VGE8 651 aaPredicted RBP6.81□□□□□ -1.32
VRK1-206ENST00000557222 BNIP1Q12981 228 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 IL13RA2Q14627 380 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 CDK5R1Q15078 307 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 PNLIPRP3Q17RR3 467 aa6.81□□□□□ -1.32
VRK1-206ENST00000557222 SLC25A30Q5SVS4 291 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms