RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 MSTNO14793 375 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 SFTA3P0C7M3 94 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 CBR1P16152 277 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 KIR2DS4P43632 304 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 KIR2DS1Q14954 304 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 OR8G2PQ6IF36 304 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 LHFPL1Q86WI0 220 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 SFT2D1Q8WV19 159 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 KCNJ16Q9NPI9 418 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 GLS2Q9UI32 602 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 CST4P01036 141 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 RUNX1Q01196 453 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 PJVKQ0ZLH3 352 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 FDCSPQ8NFU4 85 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 PHYHIPLQ96FC7 376 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 ADGRG7Q96K78 797 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 SPIN2AQ99865 258 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 SPIN2BQ9BPZ2 258 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 UQCC1Q9NVA1 299 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 LHX6Q9UPM6 363 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 DTYMKP23919 212 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 RNPS1Q15287 305 aaKnown RBP13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 SPINK9Q5DT21 86 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 RNFT1Q5M7Z0 435 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 GPR157Q5UAW9 335 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 FBXW9Q5XUX1 488 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 ETV3LQ6ZN32 361 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 OR5C1Q8NGR4 320 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 ISOC2Q96AB3 205 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 SNAPINO95295 136 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 KRASP01116 189 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 MMP7P09237 267 aaPredicted RBP13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 GCH1P30793 250 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 PEA15Q15121 130 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 CEACAM21Q3KPI0 293 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 AKR1C8PQ5T2L2 129 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 ZNF818PQ6ZRF7 136 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 DEFB108BQ8NET1 73 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 OR10V1Q8NGI7 309 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 SLC25A40Q8TBP6 338 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 HPSE2Q8WWQ2 592 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 SLX1AQ9BQ83 275 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 DDA1Q9BW61 102 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 SH2D2AQ9NP31 389 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 KCNIP1Q9NZI2 227 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 ATRXP46100 2492 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 IGKV1D-13A0A0B4J2D9 117 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 HMGB3O15347 200 aaKnown RBP13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 IGKV1-13P0DP09 117 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 SURF2Q15527 256 aaPredicted RBP13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 SPANXN5Q5MJ07 72 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 OR1K1Q8NGR3 316 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 OR10Z1Q8NGY1 313 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 DNAJB11Q9UBS4 358 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 URGCP-MRPS24S4R325 110 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 IGF2RP11717 2491 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 PROB1E7EW31 1015 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 NPBWR1P48145 328 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 PPP1CBP62140 327 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 ZNF273Q14593 569 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 WBP1Q96G27 269 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 OR1A1Q9P1Q5 309 aa13.15□□□□□ -0.3
TMEM55B-207ENST00000557041 MED12LQ86YW9 2145 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 CHST1O43916 411 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 WISP2O76076 250 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 NAT1P18440 290 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 ZNF816Q0VGE8 651 aaPredicted RBP13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 CCDC54Q8NEL0 328 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 SCGB1C1Q8TD33 95 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 C14orf79Q96F83 325 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 RTL8AQ9BWD3 113 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 REPIN1Q9BWE0 567 aaKnown RBP13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 RPL36A-HNRNPH2H7BZ11 118 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 DEDDO75618 318 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 CEACAM6P40199 344 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 OR2C3Q8N628 320 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 LHFPL5Q8TAF8 219 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 NUDT16L1Q9BRJ7 211 aaKnown RBP13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 HINT2Q9BX68 163 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 IFNA5P01569 189 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 ZNF806P0C7X5 589 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 EDDM3BP56851 147 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 ZNF154Q13106 437 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 TMEM187Q14656 261 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 STX12Q86Y82 276 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 OR5T1Q8NG75 326 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 C1QTNF5Q9BXJ0 243 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 PLEKHA2Q9HB19 425 aa13.14□□□□□ -0.31
TMEM55B-207ENST00000557041 DBX1A6NMT0 343 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 LINC01387J3KSC0 135 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 CD37P11049 281 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 ELLP55199 621 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms