RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CGB7P0DN87 165 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 CDK2P24941 298 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 GLP1RP43220 463 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 C17orf58Q2M2W7 97 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 UBE2UQ5VVX9 321 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 LHFPL4Q7Z7J7 247 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 Q96M66 194 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 CLEC7AQ9BXN2 247 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 CST11Q9H112 138 aa18.55■□□□□ 0.56
TDP1-216ENST00000556867 KBTBD11-OT1A0A1B0GTJ5 212 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 SLC22A1O15245 554 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 CRTAPO75718 401 aaPredicted RBP18.54■□□□□ 0.56
TDP1-216ENST00000556867 ATAD3CQ5T2N8 411 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 SLC35E4Q6ICL7 350 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 ZNF565Q8N9K5 539 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 OR13A1Q8NGR1 328 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 FCGR1BQ92637 280 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 SELENOIQ9C0D9 397 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 LINC00574Q9H8X3 128 aa18.54■□□□□ 0.56
TDP1-216ENST00000556867 TMEM30CPA0ZSE6 113 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 CRYBA1P05813 215 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 HTR2CP28335 458 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 CD34P28906 385 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 GDNFP39905 211 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 DYNC1I2Q13409 638 aaKnown RBP18.53■□□□□ 0.56
TDP1-216ENST00000556867 LRRC75BQ2VPJ9 315 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 LDLRAD2Q5SZI1 272 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 MINOS1Q5TGZ0 78 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 ZNF773Q6PK81 442 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 CD200R1LQ6Q8B3 271 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 RTN4RL2Q86UN3 420 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 OR6M1Q8NGM8 313 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 MALSU1Q96EH3 234 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 GFI1Q99684 422 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 SSX3Q99909 188 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 CALYQ9NYX4 217 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 MINOS1-NBL1R4GNA1 71 aa18.53■□□□□ 0.56
TDP1-216ENST00000556867 H3BUX3 64 aa18.52■□□□□ 0.56
TDP1-216ENST00000556867 OMGP23515 440 aa18.52■□□□□ 0.56
TDP1-216ENST00000556867 CALRP27797 417 aaKnown RBP18.52■□□□□ 0.56
TDP1-216ENST00000556867 BAIAP2L2Q6UXY1 529 aa18.52■□□□□ 0.56
TDP1-216ENST00000556867 GDPGP1Q6ZNW5 385 aa18.52■□□□□ 0.56
TDP1-216ENST00000556867 NEK7Q8TDX7 302 aa18.52■□□□□ 0.56
TDP1-216ENST00000556867 TAF15Q92804 592 aaKnown RBP eCLIP18.52■□□□□ 0.56
TDP1-216ENST00000556867 FAM46BQ96A09 425 aa18.52■□□□□ 0.56
TDP1-216ENST00000556867 C1RLQ9NZP8 487 aa18.52■□□□□ 0.56
TDP1-216ENST00000556867 A0A087X0M5 115 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 A0A1B0GX30 115 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 VGLL3A8MV65 326 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 CCRL2O00421 344 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 NDUFA7O95182 113 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 IL1AP01583 271 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 VSIG8P0DPA2 414 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 PAX6P26367 422 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 RELBQ01201 579 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 RBM39Q14498 530 aaKnown RBP18.51■□□□□ 0.55
TDP1-216ENST00000556867 RAB12Q6IQ22 244 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 BRICD5Q6PL45 260 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 ZNF497Q6ZNH5 498 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 DYNAPQ8N1N2 210 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 ABHD12Q8N2K0 398 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 MRGPRDQ8TDS7 321 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 KIRREL1Q96J84 757 aa18.51■□□□□ 0.55
TDP1-216ENST00000556867 TRDV1A0A1B0GX56 115 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 MCRIP1C9JLW8 97 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 NPIPB11E5RHQ5 1161 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 H3BUI4 141 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 SLC17A2O00624 439 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 BPNT1O95861 308 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 MPIG6BO95866 241 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 GLAP06280 429 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 GALP22466 123 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 PSMB9P28065 219 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 KCTD21Q4G0X4 260 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 SIGIRRQ6IA17 410 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 C3orf56Q8N813 242 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 OR4P4Q8NGL7 312 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 KCNG3Q8TAE7 436 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 ZNF596Q8TC21 504 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 TMEM59Q9BXS4 323 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 ZNF286AQ9HBT8 521 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 AK6Q9Y3D8 172 aaKnown RBP18.5■□□□□ 0.55
TDP1-216ENST00000556867 MMP24Q9Y5R2 645 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 PEX16Q9Y5Y5 336 aa18.5■□□□□ 0.55
TDP1-216ENST00000556867 IGLV1-47P01700 117 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 MT-ND4P03905 459 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 FUT3P21217 361 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 CFPP27918 469 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 RAG2P55895 527 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 RPS27AP62979 156 aaKnown RBP18.49■□□□□ 0.55
TDP1-216ENST00000556867 QRFPP83859 136 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 OR10K2Q6IF99 312 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 OR10A7Q8NGE5 316 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 OR4F5Q8NH21 305 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 PLGRKTQ9HBL7 147 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 IDI2-AS1Q9NZ38 188 aa18.49■□□□□ 0.55
TDP1-216ENST00000556867 TRAV1-2A0A0B4J238 106 aa18.48■□□□□ 0.55
TDP1-216ENST00000556867 TRAV39A0A0B4J263 110 aa18.48■□□□□ 0.55
TDP1-216ENST00000556867 FAM172BPA6NC97 362 aa18.48■□□□□ 0.55
TDP1-216ENST00000556867 TMEM14DPA8MWL7 114 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms